| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0008 |
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| Symbol | |
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| ID | 3747878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 10861 |
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| End bp | 12009 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637772532 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_378330 |
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| Protein GI | 78187992 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0203346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCAC TCTCGATTCT TGGTAGTACT GGCTCAATTG GCTTGAGCAC GCTTGATGTT
GTTCGTCAAC ATCGCGACCG TTTTACCATT GTTGGCTTAG CCGAAGGGCA TGATGTTGCA
GCTCTTGCCG CGCAAATTGA GGAATTTAAA CCGCTTGCGG TGTCGGTGCG CGATGCCGAG
TCGGCAAAGA AATTGCAGGA ACTGCTTGGT GCGCACAAAC CTGAAGTCTA TTATGGACTT
GATGGAGCGG CTACCATTGC CGCGCTTGAT GGTGTTGATA TGGTGGTTTC GGCAATTGTT
GGTGCCGCTG GCTTGCGTCC AACGGTTGCA GCCATTAAAG CGGGCAAGCA CATTGCGCTT
GCTAATAAAG AGACGCTAGT GGTTGCAGGA GAGTTGGTGT CGCGTTTAGT GGCAGAGCAC
AAGGTGCATC TTTTGCCGGT TGATAGCGAG CATTCGGCTA TTTTTCAATC GCTTGCTGGG
CATCGCGCTG AGGATGTTGA GCGCATTATT TTAACCGCAT CAGGCGGACC ATTCCGCAAA
ACATCAGCCG AAGAGCTAAA GCAAGTAACA CTTGAGCAAG CCTTAAAACA TCCGCAATGG
TCAATGGGAG CAAAAATCAC CATTGATTCT GCTACGTTAA TGAATAAAGG CTTGGAAGTT
ATTGAAGCAC ATTGGCTCTT TAATATGCCT GCTGAAAAAA TTGGCGTTGT GGTGCATCCA
CAAAGCATTA TCCACTCTAT GGTGGAATAC ATTGATGGTT GTGTGATTGC ACAACTTGGT
GCCCCCGATA TGCGTGCGCC AATTGCATAC GCGCTTTCGT GGCCTGAGCG TTGCGAAAGT
GGCATTCACA AGCTTGATCT TGCCAAAATT GCAACACTTA CCTTTGAAGA GCCCGATATG
GAGCGCTTTC CTGCCTTGCG CTTAGCTTTT GATGCTTTAA AAGCAGGGGG TACTTATCCA
GCCGTGCTTA ATGCAGCTAA TGAAATTGCG GTAGCTGCAT TCCTTGAGCG CAAAATTGGT
TTCCTTGATA TTGCTGCAAT GGTTGAAAAA ACCATGCAAG CGCATGAAGC TTTTACACCC
GTAGAGCTTG AAGAGTATTT GCAGGTTGAC CGCTGGGCTC GCGATACCGC AAAAACTTTC
TTACCATAG
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| Protein sequence | MRALSILGST GSIGLSTLDV VRQHRDRFTI VGLAEGHDVA ALAAQIEEFK PLAVSVRDAE
SAKKLQELLG AHKPEVYYGL DGAATIAALD GVDMVVSAIV GAAGLRPTVA AIKAGKHIAL
ANKETLVVAG ELVSRLVAEH KVHLLPVDSE HSAIFQSLAG HRAEDVERII LTASGGPFRK
TSAEELKQVT LEQALKHPQW SMGAKITIDS ATLMNKGLEV IEAHWLFNMP AEKIGVVVHP
QSIIHSMVEY IDGCVIAQLG APDMRAPIAY ALSWPERCES GIHKLDLAKI ATLTFEEPDM
ERFPALRLAF DALKAGGTYP AVLNAANEIA VAAFLERKIG FLDIAAMVEK TMQAHEAFTP
VELEEYLQVD RWARDTAKTF LP
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