Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0002 |
Symbol | |
ID | 3747795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 2113 |
End bp | 3237 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637772525 |
Product | DNA polymerase III, beta chain |
Protein accession | YP_378324 |
Protein GI | 78187986 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0511069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTC TTTCTTCAAT TCGACAATTG CAAGAGCCTG TTGCTAAGGT GGCTCAAGCA ATACCAAGTA AAAGTGTTGA TGGACGTTAC GATAACATCC ACTTTACATT GGAACCCAAT GCGTTAACCT TGTTTGGTAC TGATGGTGAA CTTTCCATTA CCGCTAAAAT AGAGGTAGAA AGCACCGATA GTGGGCATAT TGGCATTAAT GCTCGGACGC TACAGGATTT TTTACGGAGT ATGTACGATA CCCCAGTAAC CCTCTCCATT GAACGCCAAG AAATTAGCGA TCATGGAATG GTAGAAGTAA CGACGGATAA AGGTCGTTAT AAAATTGTCT GCTTATTTGA AAGTAAGCCT GAACGGTACG ATAAGGTCTA TGATATTACG CTCGACCTCC CCACCTCTGA ATTATTAGGT TTAGTACAAA AAACCCTCTT TGCTTGCAGT ATTGATGGTA TGCGTCCTGC AATGATGGGT GTACTTTTTG AGTTAGAAGG TACCACCATT ACCGCTGTAG CTACCGATGG ACATCGCTTA GTGCGCTGCC GTAAAGAATC CTCGCTGGAT ATTGCTGAAA AGCAAAAAAT AGTGTTACCT GCTCGTGTGC TTTCCATTTT ACAAAAGTTG GCACAGCATG AATCTATTAC CATGTGTGTG AGCACCGATC GTCGTTTTGT GCGTTTTATC AGTGGTCATA TGATTTTGGA TGCAGCCCTC ATTGTAGAAC CATACCCTAA TTACAATGCA GTAATTCCTG TAGAGCATGA TAAAAATGTA GTGATTAATC GCCAAAGCTT TTACGATTCA GTACGTCGTG TTGGGCGTTT TTCAAGTATT GATGATATTC GTTTAATTCT TGAAAATGAT CGTTTAACGG TAATGGCTGA AAATACCAGT GATGGAGAAG CAGCACAAGA AGAGCTACCA TGTAGCTACA ATGGTGAGCC TATGACGATT GGTTTTAATG CAAAATTTGT GGAAGCTGCT TTAGCACATC TTGATGATGA AGAAATTTTA ATTGAGTTAA AAAGCCCCAC AACAGCGGTT ATTTTCACCT CTTCAAAAAT TGAAGATCGT GATAAGTTGA TTATTTTGGT GATGCCTGTT CGTATTAATA GCTAA
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Protein sequence | MKILSSIRQL QEPVAKVAQA IPSKSVDGRY DNIHFTLEPN ALTLFGTDGE LSITAKIEVE STDSGHIGIN ARTLQDFLRS MYDTPVTLSI ERQEISDHGM VEVTTDKGRY KIVCLFESKP ERYDKVYDIT LDLPTSELLG LVQKTLFACS IDGMRPAMMG VLFELEGTTI TAVATDGHRL VRCRKESSLD IAEKQKIVLP ARVLSILQKL AQHESITMCV STDRRFVRFI SGHMILDAAL IVEPYPNYNA VIPVEHDKNV VINRQSFYDS VRRVGRFSSI DDIRLILEND RLTVMAENTS DGEAAQEELP CSYNGEPMTI GFNAKFVEAA LAHLDDEEIL IELKSPTTAV IFTSSKIEDR DKLIILVMPV RINS
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