Gene Syncc9902_2303 details

Gene Information

• Locus tag: Syncc9902_2303
• Symbol: dnaK
• ID: 3743457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: -
• Start bp: 2213539
• End bp: 2215458
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637772505
• Product: molecular chaperone DnaK
• Protein accession: YP_378304
• Protein GI: 78185870
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAAAG TTGTCGGCAT TGACCTTGGC ACCACGAACA GCTGCGTTTC TGTGATGGAG 
GGTGGTAAGC CCACCGTTAT CGCCAACGCC GAGGGCTTCC GCACAACGCC CTCCGTTGTT 
GCATACACCA AGAACCAAGA CCAACTGGTT GGCCAAATCG CCAAACGCCA GGCGGTGATG 
AATCCGGCTA ACACGTTTTA TTCGGTCAAG CGCTTCATCG GCCGTCGGGT TGATGAGGTG 
AGCGAGGAAC AGAAAGAAGT GAGTTACGGA GTCGAAAAAT CCGGCTCGAA CGTGAAAGTG 
AAATGTCCTG TGTTGGACAA GCAGTTTGCC CCGGAAGAGG TGTCTGCTCA GGTGTTGCGC 
AAGTTGGCGG AAGATGCAGG CAAGTATTTG GGAGAGAGCG TCACCCAAGC GGTAATCACA 
GTTCCTGCGT ACTTCAACGA CTCACAGCGC CAGGCGACGA AGGATGCTGG AAAGATCGCT 
GGCCTTGAGG TGCTTCGCAT CATCAACGAG CCCACAGCGG CGGCTTTGGC CTACGGCCTC 
GATAAAAAGA GCAACGAACG AATTCTGGTT TTTGACCTCG GCGGCGGCAC ATTCGATGTC 
TCTGTTTTGG AGGTTGGCGA TGGTGTTTTC GAAGTTCTGT CCACCTCCGG TGACACCCAC 
CTCGGTGGTG ATGATTTCGA CAAAGTGATC GTTGATCACT TGGCTGCAAC GTTCAAATCG 
AACGAAGGTA TCGATCTGCG CCAGGACAAG CAAGCTCTGC AGCGACTGAC TGAAGCCGCT 
GAAAAAGCCA AGATCGAGCT CTCCAATGCC ACCCAAAGCG AGATCAATTT GCCGTTTATT 
ACGGCGACCC CTGAGGGGCC AAAGCACCTC GATCTCACTT TGACGCGGGC CAAATTCGAG 
GAATTGGCAT CGAATCTGAT CGACCGCTGC CGGGTTCCCG TGGAGCAGGC TCTGAAAGAC 
GCGAAATTGT CTTCAGGTGA ACTCGACGAG ATCGTGATGG TGGGTGGCTC CACCCGCATC 
CCAGCCGTCC TTGAACTGGT TAAGCGCACC ACGAGTAAAG ATCCGAACCA AACGGTCAAC 
CCTGACGAGG TGGTGGCTGT TGGTGCTGCG ATTCAGGGGG GCGTTCTTGC CGGAGAGGTG 
AAGGACATTC TTCTCCTGGA TGTCACGCCG TTGTCCTTGG GTGTGGAGAC CCTGGGCGGT 
GTGATGACCA AGATGATCAC CCGCAACACC ACTGTTCCCA CCAAGAAGTC GGAGACCTAT 
TCCACGGCTG TAGACGGTCA GACGAACGTG GAAATTCACG TGCTCCAGGG TGAGCGCGAA 
ATGGCATCGG ATAACAAGTC TCTCGGAACC TTCCGGCTCG ATGGCATTCC CCCTGCTCCT 
CGGGGTGTTC CTCAAATTGA AGTGACGTTC GATATCGATG CCAATGGAAT CCTGAGCGTT 
ACTGCCAAGG ACAAGGGCAG CGGCAAGGAG CAGTCCATCT CGATCACCGG TGCTTCGACC 
CTGTCGGATT CTGAGGTCGA CAAGATGGTG AAGGACGCCG AGACCAACGC CAGCGCTGAC 
AAGGAGAAGC GTGAAAAGAT CGACCTGAAG AATCAGGCCG AAACCCTCGT CTATCAGGCT 
GAAAAGCAGA TGGGCGAACT GGGCGACAAG GTTGATGCCG ATGCCAAGGC AAAGGTGGAA 
GAGAAGCGCA TCAAGCTCAA GGACGCTGTC GAAGCAGAGG ATTACGACGC GATGAAGACT 
CTGCTGGAGG AATTGCAGCA GGAGCTCTAC ACCGTGGGTG CGTCGGTCTA CCAACAAGAC 
GGCGCCCAAG CCGGCGGTGC AGCGCCTGAA GGCGACGCCG CAGCTGGTGC CAATGCTGCT 
GCTGGTGGCG GAAACGCCGC TGACGACGTG ATCGATGCGG AATTCACCGA AACCAAATAA 

 

Protein sequence

MGKVVGIDLG TTNSCVSVME GGKPTVIANA EGFRTTPSVV AYTKNQDQLV GQIAKRQAVM 
NPANTFYSVK RFIGRRVDEV SEEQKEVSYG VEKSGSNVKV KCPVLDKQFA PEEVSAQVLR 
KLAEDAGKYL GESVTQAVIT VPAYFNDSQR QATKDAGKIA GLEVLRIINE PTAAALAYGL 
DKKSNERILV FDLGGGTFDV SVLEVGDGVF EVLSTSGDTH LGGDDFDKVI VDHLAATFKS 
NEGIDLRQDK QALQRLTEAA EKAKIELSNA TQSEINLPFI TATPEGPKHL DLTLTRAKFE 
ELASNLIDRC RVPVEQALKD AKLSSGELDE IVMVGGSTRI PAVLELVKRT TSKDPNQTVN 
PDEVVAVGAA IQGGVLAGEV KDILLLDVTP LSLGVETLGG VMTKMITRNT TVPTKKSETY 
STAVDGQTNV EIHVLQGERE MASDNKSLGT FRLDGIPPAP RGVPQIEVTF DIDANGILSV 
TAKDKGSGKE QSISITGAST LSDSEVDKMV KDAETNASAD KEKREKIDLK NQAETLVYQA 
EKQMGELGDK VDADAKAKVE EKRIKLKDAV EAEDYDAMKT LLEELQQELY TVGASVYQQD 
GAQAGGAAPE GDAAAGANAA AGGGNAADDV IDAEFTETK