| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2296 |
|---|
| Symbol | |
|---|
| ID | 3743450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 2203993 |
|---|
| End bp | 2206575 |
|---|
| Gene Length | 2583 bp |
|---|
| Protein Length | 860 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637772498 |
|---|
| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|---|
| Protein accession | YP_378297 |
|---|
| Protein GI | 78185863 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1049] Aconitase B |
|---|
| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.990921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACG CCTACAGCAA GCTGGCCGCA GAACGAGAAG CCCAGGGCGT TCCGGCGTTG
CCGCTGACTG CTGAGCAAAC CAAAGACCTC ACTCAACTGC TCGAAAATCC GCCGACAGAT
CAAAAGCAGA TCCTGCTGGA GCTGCTCAGT GATCGCATTC CACCTGGGGT TGATGAAGCG
GCCTACGTAA AAGCAACCTG GCTTAGCGCT GTGGCCCAGG GCAATGCGAG CAGTCCTTTC
GTTACGCCCC TTGAAGCAAC ACGGCTCCTG GGAACGATGG TTGGCGGCTA CAACGTGGCT
GCCCTGATCG AACTGCTGAA CAACAGTGAT GAGGAACTGG CCAAATGTGC AGCCCAAGGA
CTAAGCCGCA CGCTGCTGGT TTACGACGCC TTCAATGAAG TGATGGACCT GGCCACCAGC
AATCGCTTCG CCAAGCAGGT GGTCGACAGT TGGGCAGCTG CTGAGTGGTT CACAACAAAA
GCCGAGCTAG CCGAATCGAT CACCGTGACC GTGTTCAAGG TGGACGGAGA AACCAACACC
GACGACCTCT CCCCAGCCAC CCATGCCACA ACACGGCCTG ACATCCCCCT GCATGCTCTG
GCGATGCTGG AGACGAGAGA CCCCAACGGG CTCAACACCA TTGCGAAGCT GAAAGAGAAC
GGCCATCCAG TGGCCTACGT CGGCGATGTG GTGGGTACAG GCAGCTCACG AAAAAGTGCG
ATCAACTCCG TTCTTTGGCA TACGGGTAAT GACATTCCCC ACGTGCCAAA CAAACGCGCT
GGAGGCGTAA TTCTCGGCGG CAAAATCGCC CCAATCTTTT TCAACACCGC GGAAGATTCC
GGCGCGCTTC CGATCGAATG TGATGTCAGC CAACTGAACA CAGGTGATGT GATCACGATC
CGTCCCCATG CCGGCACGGT CGAACGCGAT GGAACGGTGA TCAGCCACTT TGATTTGAAA
CCCAGCACGA TCAGCGATGA GGTGCGGGCT GGCGGCCGAA TTCCTCTCAT GATCGGCAGG
GCCCTCACCG ACAAAGTTCG CAACCAGCTG GGACTTCCTC CCTCAGAGGT ATTTATTCGC
CCGAGCACCC CTCAGGACAA CGGCAAAGGA TTCACCTTGG CCCAAAAAAT GGTTGGCAAA
GCGTGTGGAC TCCCCGGTGT ACAGCCCGGA ACGAGCTGCG AACCCCTCAT GGCCACGGTC
GGCTCTCAAG ACACCACAGG TCCGATGACC CGTGACGAGA TGAAGGAACT GGCTTGTCTG
GGCTTCTCCT CCGACTTAGT GATGCAGAGC TTTTGCCATA CAGCGGCCTA TCCGAAGCCT
GTCGACCTCC AAACCCAACA AGACCTTCCC GATTTCTTTG CTCAGCGCGG CGGAGTTGCC
CTGCGACCAG GAGACGGGAT TATCCACAGC TGGCTGAATC GCATGCTTCT GCCAGACACC
GTGGGTACGG GGGGGGACAG TCACACCCGA TTCCCCCTCG GTATTTCGTT CCCGGCAGGT
TCAGGCTTGG TGGCATTTGC CGCGGCCATC GGCGCCATGC CTTTGGATAT GCCGGAATCT
GTTTTAGTGC GATTCAGCGG CGCACTGCAG CCGGGCGTGA CCTTACGAGA TGTGGTGAAT
GCCATCCCGT GGGTGGCCAT TCAACGGGGC CTGCTCACGG TGGAAAAAGC CAACAAAAAA
AATATTTTCA ATGGCCGAAT CATGGAAATC GAAGGTCTTC CTGATTTGAA ACTCGAACAG
GCCTTTGAAC TCACCGACGC CACAGCAGAG CGATCGTGCG CGGGCTGCAC CATCAAACTC
TCCGAAGCAA CGGTGAGTGA ATACTTACGC AGCAATGTGG CTTTGCTGAA GAACATGATC
GCGCGGGGCT ACAGCGATGC GCGAACCCTC GCGCGACGGG TGAAAGCGAT GGAGGACTGG
CTGGCGAATC CCCAGCTTCT TCAGGCAGAT GCCGATGCGG AATACGCCGA GATCCTTGAG
ATCAATCTCG ATGAACTCAC CGAACCGGTT CTGGCCTGCC CCAACGATCC CGACAATGTG
AAGCTGCTGA GCGAGGTGGC TGGAAACGCC GTTCAGGAGG TCTTCATTGG TTCGTGCATG
ACCAACATCG GCCATTACCG CGCCGCCGCG AAAGTGCTGG AAGGTTCCGG CAGCAACAAA
GCTCGACTCT GGGTTTGTCC ACCCACAAGG ATGGACGAAC AAATGCTGAA GCAAGAGGGG
TACTACGCCA CCTTCGAAGC AGCTGGTAGT CGAATGGAAA TGCCTGGATG CTCCCTTTGC
ATGGGAAATC AGGCCCGTGT GGACGACGAC ACCACCGTGT TCTCCACCAG CACACGCAAC
TTCAACAATC GTTTGGGGAA AGGCGCCCAG GTGTATCTAG GTAGTGCAGA GCTAGCAGCC
GTTTGTGCAC TTTTAGGCCG CATTCCCAAC CCCGAGGAGT ACCAACGCAT CGCCGCAGAA
AAAATCAATC CTCTGTCGGA TGAGCTTTAC CGCTACCTGA ACTTCGACCA AATTGCTGGA
TTCGAGGACC AAGGGCGTGT GATGAGCGCC GACGACGAAG CCGCAGTTTT GGCACAAGCC
TGA
|
|---|
| Protein sequence | MLNAYSKLAA EREAQGVPAL PLTAEQTKDL TQLLENPPTD QKQILLELLS DRIPPGVDEA
AYVKATWLSA VAQGNASSPF VTPLEATRLL GTMVGGYNVA ALIELLNNSD EELAKCAAQG
LSRTLLVYDA FNEVMDLATS NRFAKQVVDS WAAAEWFTTK AELAESITVT VFKVDGETNT
DDLSPATHAT TRPDIPLHAL AMLETRDPNG LNTIAKLKEN GHPVAYVGDV VGTGSSRKSA
INSVLWHTGN DIPHVPNKRA GGVILGGKIA PIFFNTAEDS GALPIECDVS QLNTGDVITI
RPHAGTVERD GTVISHFDLK PSTISDEVRA GGRIPLMIGR ALTDKVRNQL GLPPSEVFIR
PSTPQDNGKG FTLAQKMVGK ACGLPGVQPG TSCEPLMATV GSQDTTGPMT RDEMKELACL
GFSSDLVMQS FCHTAAYPKP VDLQTQQDLP DFFAQRGGVA LRPGDGIIHS WLNRMLLPDT
VGTGGDSHTR FPLGISFPAG SGLVAFAAAI GAMPLDMPES VLVRFSGALQ PGVTLRDVVN
AIPWVAIQRG LLTVEKANKK NIFNGRIMEI EGLPDLKLEQ AFELTDATAE RSCAGCTIKL
SEATVSEYLR SNVALLKNMI ARGYSDARTL ARRVKAMEDW LANPQLLQAD ADAEYAEILE
INLDELTEPV LACPNDPDNV KLLSEVAGNA VQEVFIGSCM TNIGHYRAAA KVLEGSGSNK
ARLWVCPPTR MDEQMLKQEG YYATFEAAGS RMEMPGCSLC MGNQARVDDD TTVFSTSTRN
FNNRLGKGAQ VYLGSAELAA VCALLGRIPN PEEYQRIAAE KINPLSDELY RYLNFDQIAG
FEDQGRVMSA DDEAAVLAQA
|
|---|
| |