Gene Syncc9902_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2285 
Symbol 
ID3743439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2193408 
End bp2194295 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content50% 
IMG OID637772485 
Productformate and nitrite transporters 
Protein accessionYP_378286 
Protein GI78185852 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACG TTCTTCCAAA TGAACTTGTC GACGGCATGA TTACTGCCGG CGGCAAAAAA 
GCAACAGTCA GCATTAAAAA TTTGCTGATT CGTGGCTTCT ACTCCGGCGC GATTCTTGGA
CTCGCTGTGA TTCTTGCGCT CACAGTTGGA ATCCTCACTA AATTGCCGTT TGTTGGCTCT
TTACTCTTTC CTTTCGGTTT CGCCAGCATC GTGCTTTTTG GCATGGAGCT CGTCACCGGA
AACTTTGCTC TACTTCCGAT GGCAACTTGG GCGGGCAAGA GCACCTGGGG CGCTACTTTC
CGCAATTGGA CTTGGGTGTG GATTGGTAAT TTTATTGGCA CCGCTGTTGT GGCGCTGATC
ATGGCGATCA GCCTCACCAG CGGTTCGATG GATGCGGCAG CAGACAACAT TGGACCTCCA
ATTTGGGACC TGGTTGCTCA AAAAATCGTT GCTCTCAATC AAATTAACGT TGAGAAAAAG
TACGAAGCGC TGGGCAGCAT GGGTTTCTTC CTCGCATTCC TCCGCGGTGT TGTTGCGAAC
TGGTTGGTGT GTCTTGGCGT CACCATGGCT TTGGTTAGCA AAAGCGTTCC AGGCAAACTT
CTTGCCTGCT GGCTGCCGAT CACGGCTTTC CAAACAATGG GAATGGAGCA CATTGTGGTG
AATCAGTTTT TACATACAGC TGGTCCAATT CTTGGATCTG GAGTGCCTTT TACGAAAGTA
ATTTTCTGGA ACTTCCTTCC TGTTACCCTC GGCAATATCA TTGGTGGAAT GGTGTTTATT
GGAATGCTCT TCTACAGCAC CCATCGCACC ACCATGGAAA ACGTGCTTCC CACCGAGCAC
GATGACAAAC TAGAGCGTGA ACTGGCAGCC GAGCTTGGTG CCCGCTGA
 
Protein sequence
MDYVLPNELV DGMITAGGKK ATVSIKNLLI RGFYSGAILG LAVILALTVG ILTKLPFVGS 
LLFPFGFASI VLFGMELVTG NFALLPMATW AGKSTWGATF RNWTWVWIGN FIGTAVVALI
MAISLTSGSM DAAADNIGPP IWDLVAQKIV ALNQINVEKK YEALGSMGFF LAFLRGVVAN
WLVCLGVTMA LVSKSVPGKL LACWLPITAF QTMGMEHIVV NQFLHTAGPI LGSGVPFTKV
IFWNFLPVTL GNIIGGMVFI GMLFYSTHRT TMENVLPTEH DDKLERELAA ELGAR