Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2272 |
Symbol | |
ID | 3743764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 2181775 |
End bp | 2184006 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637772472 |
Product | nitrate reductase |
Protein accession | YP_378273 |
Protein GI | 78185839 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCAAA GCCCCCGCAG CGTGCGCAGC CAATGCCCCT ACTGCGGAGT GGGCTGCGGC CTTGAACTCC TACCCCCTGC TGAGAAAGGT CGACCTGTCC GTAGGGATGC GGAAGGCAAC CCAATGTGGA CAGCCCGTGG CGACCGGCAA CATCCCTCCA GCCTCGGTCA GGTGTGCATC AAAGGTGCCA CCGTCGGCGA AACCCTCGCC AGTGGTCGGC TCCGCCAACC ACTGTTCCGC AGCAACTTCA GTGACGACTT TGAACCCATT GGTTGGGATG ACGCGCTTGA GCGAATCACC AAGCAAATGA CTTGCAGCTT GGAACGTCGA GGCCATGCCA ATGGCATTGC GATGTATGGC TCTGGTCAGT TCCACACAGA GGACTACTAC GTCGCCCAAA AGCTGATGAA GGGTGCCCTT GGCACCAACA ACTTTGATGC CAACTCACGT CTATGTATGA GCTCAGCCGT GGCTGGGTAC ACCCGAAGTC TCGGATCTGA CGGCCCTCCC TGCTGCTACG ACGACCTCGA TCACTGCAGC GTTGCATTCC TCATTGGCAC CAACACAGCC GAATGCCATC CAGTGTTGTT CCAGCGTCTG CTGAAACGCA AAAAACGCAA TCCCGGAAGC GTAACGATCG TTGTGGTCGA TCCCCGCCGA ACCGATACCG CTAAAGCAGC AGACATTCAC CTACCAATCG CACCAGGAAG TGATCTCGCC TTGCTTCATG GCATTGCTCA CCTGATTCTT CGAGAAAATG GACAAGATCC AGCATTCATT GATGACCACA CCGAAAACTA CGAAGCCTTT TTCGACGTCG TAGCCCGCTG GACGCCAAGA CGCGTAGCGC GCTTCTGCAA CCTCCCCGAA AAGCGATTAC GGGAGGTCGC GCAATTGTTC CACCGGCGTG AAGACGTCCT CAGTCTTTGG TCGATGGGGG TGAACCAGCG GCAAGAAGGC ACCGCTGTGG TGTGCGGCCT AATCAACCTG CACTTACTCA CCGGACAAAT TGGCAAAGAG GGAGCTGGCC CCTTCTCTCT AACGGGACAA CCCAACGCCA TGGGCGGCCG TGAAGCAGGT GGTTTATCCC ACCTGCTTCC GGGTTATCGA TTCGTCGCTA ACGGGCAACA TCGACAGGAC GTTGAGCAAG CTTGGGATTT TCCAGCCGGC AGCATCGCAG CAACACCAGG GCTAGCGGCT TGGCAACAGA TTGAAGCGAT GGAGAGGGGC GAGCTCGACC TCTGGTGGGT GGCCGCAACC AATCCCCTCG TCAGCATGCC TGATCTGGAC AGGGTGAAAG CTGCCATGAG CAAATGTCCT CTGGTCGTGG TGAGTGAGGC CTACGCCGAT TCCGAAACCT CCCATTACGC ACATTTGCTG CTTCCCGCGG CCCAATGGAG CGAGAAGGCG GGAGCCATGA CGAACTCGGA ACGCAGAATC ACTTATTGCC CCGCTTACCG CCGCCGGTTT GGCGAGAGCC GACCGGATTG GGAGGTGTTT GCAGAGGTGG GGCAACGGCT TGGCTTTGAG AAGCAGTTCC ACTTCAACTC AGCCGCGGAC GTCTATGCCG AATTTGCTGA GCTCACCCGA GGTCGGCTCT GCGACATGTC TGGCCTAAGC CATGCCTTGC TTTCAGAGGA GGGGCCGCAG CAATGGCCCT ATCCAAGTGA AAGCACCACC CCCTGCGAAT CCAAACGGCT CTACACCGAC CATCATTTTG CAACGCCTTC CGGGCGGGCG CGCTTCAGCA TCGACCAACC GCTGGGCCTC GCTGAACCCC CATGCGACAC CTTTCCACTC GTGCTGACAG TGGGTCGCTA CCTCGGACAG TGGCACACGA TGACGCGAAC CGGAAAAGTG GAACGTCTTC ACACCATGCA CCCCGAACCA CTCCTAGAGA TTCACCCCGG CGATGCCCAA GAGCTCAAAG TTGTGAACGG TGAGTTGGCA GCGATCAGCT CTCGCCGTGG ACACATCACC GCAACAGTGA AGGTGACCGA CAGGATCCGA CGCGGCTCAG TGTTCTTGCC GATGCACTGG GGCTTTACCC AAGAGAACGC CTGCGAAGCC AACACATTGA TGCATGATCA AGCCTGTCCT ATTTCCAAGC AGCCGGAATT GAAAGCCTGT GCGGTGATCG TGGCGCCAGC GGTGTCGATG GTGAAACCCA TCGAACAAGA AAAAGGCCGA CTGGAGGCAC TACGACGCCT GCTCACCCCA ACACTTCGCT GA
|
Protein sequence | MTQSPRSVRS QCPYCGVGCG LELLPPAEKG RPVRRDAEGN PMWTARGDRQ HPSSLGQVCI KGATVGETLA SGRLRQPLFR SNFSDDFEPI GWDDALERIT KQMTCSLERR GHANGIAMYG SGQFHTEDYY VAQKLMKGAL GTNNFDANSR LCMSSAVAGY TRSLGSDGPP CCYDDLDHCS VAFLIGTNTA ECHPVLFQRL LKRKKRNPGS VTIVVVDPRR TDTAKAADIH LPIAPGSDLA LLHGIAHLIL RENGQDPAFI DDHTENYEAF FDVVARWTPR RVARFCNLPE KRLREVAQLF HRREDVLSLW SMGVNQRQEG TAVVCGLINL HLLTGQIGKE GAGPFSLTGQ PNAMGGREAG GLSHLLPGYR FVANGQHRQD VEQAWDFPAG SIAATPGLAA WQQIEAMERG ELDLWWVAAT NPLVSMPDLD RVKAAMSKCP LVVVSEAYAD SETSHYAHLL LPAAQWSEKA GAMTNSERRI TYCPAYRRRF GESRPDWEVF AEVGQRLGFE KQFHFNSAAD VYAEFAELTR GRLCDMSGLS HALLSEEGPQ QWPYPSESTT PCESKRLYTD HHFATPSGRA RFSIDQPLGL AEPPCDTFPL VLTVGRYLGQ WHTMTRTGKV ERLHTMHPEP LLEIHPGDAQ ELKVVNGELA AISSRRGHIT ATVKVTDRIR RGSVFLPMHW GFTQENACEA NTLMHDQACP ISKQPELKAC AVIVAPAVSM VKPIEQEKGR LEALRRLLTP TLR
|
| |