| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2248 |
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| Symbol | |
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| ID | 3742839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 2157097 |
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| End bp | 2158224 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637772448 |
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| Product | putative membrane protein of ABC transport system |
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| Protein accession | YP_378249 |
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| Protein GI | 78185815 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAG CGTTTCAACA ACGCCGTTGG CTCCTGGTGA TTTTTTGGGT GCTGATCATT
GCGGCAATCG TTGCAGCTCC ATCGGTGTTG CCTGTGTTCC GACTCAATCT TTTGGGCCGT
TTCCTGGCGT TGGCCATTGT TGCTTTGGGC ATCGATCTGA TCTGGGGTTT TACAGGTCTG
CTCAGCCTTG GCCAGGGCAT TTTCTTCGCA CTCGGTGGAT ATGCCGCTGC GATGTATTTG
CAATTGAATA GCTCGGAAGA CTTACTCAAC GGCATACCTG AATTTTTCAC CCTTTATGGG
GTGGATCGTC TACCGGCGTT TTGGCAACCG TTTCATTCGC CGTTGTTCAC CCTGGTGGCG
ATTTGGCTGA TCCCGGGGGT GTTGGCTGCT CTGCTTGGCA ACCTTGTTTT TCGAAATCGC
GTTAAGGGTG TTTATTTCTC AATCCTTACG CAAGCTGCCT TGTTGGTGTT TTTTAACTTC
TTCAACGGTC AGCAGAAATT GATCAATGGA ACCAATGGTC TCAAAACTGA TGTAACTCAG
TTGTTCGGTC AGATGGTGGG CTCGCCGGAG ATGCAGCGGG GCTTTTTCTG GGTCACTGCT
GTGATGGTGA TTTTCACGTG GCTATTCGTG CGCTGGGTGG TGCGTGGTCG CTTTGGTGAT
GTGTTGATTG CCATTCGAGA CGATGAACCG CGCCTTCGTT TCGCGGGGTA CAACCCCACC
TTGTTCAAAA CATTGGTGTT TGCGATTGCT GGCGGTTTGG CTGGCATCGG TGGCGCGTTG
TACACCGTTC AATCCGGAAT TGTGTCCCCC CAATTCATGA CGGTGCCGTT CTCAATTGAG
ATGGTGATTT GGGTGGCAGT TGGTGGTCGC GGCACCCTTG TGGGTGCAAT CCTCGGAGCC
GTGGCGATCA ATTACGCCAA GAGCCTGGTG AGCGAAGCCT TGCCCCAGAG CTGGCTGTTT
ATCCAGGGTG GGTTGTTCAT TCTTGTGGTG ACAGCCCTGC CGGAGGGTGT GATCGGTTGG
TTCCAAGGGG ACGGCCCCCG CAACTTGCTG AACCGCTTGG GGATGTCCCG TCGCAGTGGA
ACCTATCCCC GTCTTGAACT CGATGGACAA GAGGAGATTC AGCCATGA
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| Protein sequence | MMKAFQQRRW LLVIFWVLII AAIVAAPSVL PVFRLNLLGR FLALAIVALG IDLIWGFTGL
LSLGQGIFFA LGGYAAAMYL QLNSSEDLLN GIPEFFTLYG VDRLPAFWQP FHSPLFTLVA
IWLIPGVLAA LLGNLVFRNR VKGVYFSILT QAALLVFFNF FNGQQKLING TNGLKTDVTQ
LFGQMVGSPE MQRGFFWVTA VMVIFTWLFV RWVVRGRFGD VLIAIRDDEP RLRFAGYNPT
LFKTLVFAIA GGLAGIGGAL YTVQSGIVSP QFMTVPFSIE MVIWVAVGGR GTLVGAILGA
VAINYAKSLV SEALPQSWLF IQGGLFILVV TALPEGVIGW FQGDGPRNLL NRLGMSRRSG
TYPRLELDGQ EEIQP
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