Gene Syncc9902_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2244 
Symbol 
ID3743496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2153848 
End bp2155125 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content55% 
IMG OID637772444 
Producthypothetical protein 
Protein accessionYP_378245 
Protein GI78185811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTC AACAGGGATT GATCAGCACA GTTCATGACT ACAGCCTTGG CAATCACAAC 
GCCATCGCCT TCAACCAAGA ACTAGGCCAA AGACCAACAA CTCTGTTGAT CCCATGCCTC
ATGGAGGAAT TCAGCAGGCC TGCGCTTGCC CTCATCCGCG ACACTCTCGC CCCGCTCACA
GGCTTGAGTT CACTTGTGAT CGCACTCGCT GCAGAAAACG CAGAAGACGT TGCAGCAGCT
GAAGCCTTTT TTGCTGGAAT GCCCTTTCCT GTGCATGTGC ACTGGACCAA TGGCCCAGCA
GTCCGAGAAC TACTCGAGTC GGTCGGAAAT CTCGATTTAG ACGTGACAGG TCCACCAGGA
AAAGGTTGGG CCGTTTGGCA AGGCCTTGGG GTGGCCTGCC AAGACGCAGA AGTGGTGGGA
CTATTCGATG CAGACATTCG CACCTTTGGC GCGGCATACC CAGAGCGGAT GCTTCGGCCA
CTTCTCGACC GATCCCATGG CATCGCCTAC GTCAAAGCGT TTTACAGCCG GCTGTCCTTA
GAAACCCAAG CGTTACAGGG GCGAGCGACG CGGCTCTTTG TGGGCCCGCT CCTCGCCAGC
CTTGAACAAG TCTTCGGACC ATTGCCCTAT CTGCGCTATC TCCAGTCCTT TCGCTATCCA
CTAGCAGGTG AGTTTGCATT CACCAGCGAC TTAGCGATGA ATCTGCGCAT CCCCTCCGAT
TGGGGCTTGG AGGTTGGCTT GTTGTCCGAG GTTTATCGGC ATGTCGCTTC CAGTCGCATC
ACCCAAGTGG ACCTGGGATT GTTTGATCAC AAGCACAAAG GTTTGGGCAA TCAACCATCA
GAGGGCCTGC AGAGGATGGC AGGGGAAATT TTCGGCACCG TGCTCAGAGG CCTCATGGAG
CATGAAGGCT GCGTGATGTC GATGGATCAA CTACCCACCC TGGAAGTGCT GTACCGCAGG
GTTGGGGAAG ACCGCGTGCG TCAATTTGGC CTCGACTCCG CCATGAACCG ATTGCCCTAT
GACCGGCACC AAGAAGAGCT CACTGTTCAA AGCTTTTCTG GTTTACTAAG GCCTGGACTG
GCGAAACTGA TGGAATCGCC CATCGCCCAT CAACTACCGA GCTGGTCACG ACTCAAAAGC
TGTAATTCAG CTCTTCAAGG AGACTTGGCC GAAGCAGGAC GCGCCGATCG CCGGCGTTCT
TTCACCACAA CGCTGGCCAA ACCTCCACGC AAACCCAATT GGAATTCAAA TATTCATACA
GCACAGATTG CAGCATAG
 
Protein sequence
MDFQQGLIST VHDYSLGNHN AIAFNQELGQ RPTTLLIPCL MEEFSRPALA LIRDTLAPLT 
GLSSLVIALA AENAEDVAAA EAFFAGMPFP VHVHWTNGPA VRELLESVGN LDLDVTGPPG
KGWAVWQGLG VACQDAEVVG LFDADIRTFG AAYPERMLRP LLDRSHGIAY VKAFYSRLSL
ETQALQGRAT RLFVGPLLAS LEQVFGPLPY LRYLQSFRYP LAGEFAFTSD LAMNLRIPSD
WGLEVGLLSE VYRHVASSRI TQVDLGLFDH KHKGLGNQPS EGLQRMAGEI FGTVLRGLME
HEGCVMSMDQ LPTLEVLYRR VGEDRVRQFG LDSAMNRLPY DRHQEELTVQ SFSGLLRPGL
AKLMESPIAH QLPSWSRLKS CNSALQGDLA EAGRADRRRS FTTTLAKPPR KPNWNSNIHT
AQIAA