| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2233 |
|---|
| Symbol | aspS |
|---|
| ID | 3743485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 2140542 |
|---|
| End bp | 2142374 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637772432 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_378234 |
|---|
| Protein GI | 78185800 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGCA ACGGTTGCGG CGACCTGCGC AAAGACAGCA TTGATGCGGT TGTTCAGCTT
TGTGGCTGGG TGGATCGTCG ACGGGATCAC GGTGGTGTGA TTTTCATCGA CCTGCGAGAC
CGCAGCGGCA CCGTTCAAAT CACCGTTGAT CCGGATCTGG GTGCCGAAGC CTTCGCTGTG
GCCGAACACC TGCGCAGCGA AACCGTGCTG CAGGTGCATG GAAAGGTGCG AGCCCGACCC
GCTGAATCGC TCAACGACAA ACTCGCCACC GGGGCCGTGG AGGTGCTGGC CAGCGAGATT
GTCGTGCTCA ACAAGGTGAC CGGGAATTTG CCCTTTCCCG TGTCGGTCCA CGACGAAGAA
AACACCCGCG AAGAACTCCG CCTCCGTCAT CGCTATCTCG ATCTGCGCCG CAAGCGCATG
AACGACAACC TGCGACTTCG GGCCCGCACC ATTCAGGCCG CCCGGCGCTT TCTTGAAGAC
GAGGGCTTCA TCGAAGTGGA AACGCCGGTA CTGACCCGCT CCACCCCTGA AGGTGCCCGC
GACTATGTGC TCCCGAGCCG CGTCTGTGGC GGGGATTGGT TTGCTTTACC CCAATCGCCG
CAACTCTTTA AACAGCTTCT GATGGTGGGA GGCATTGAGC GCTATTACCA AGTGGCTCGA
TGCTTCCGAG ATGAAGACCT ACGCGCCGAT CGCCAGCCGG AATTCACCCA GCTGGATATC
GAAATGAGCT TCATGGGTGA GGAACAGATC CTCCAACTCA ATGAAGATCT GATCTGTGCG
ATCTGGAAGT CGGTGAAAGG GATCGAACTT CCCCGTCCCT TCCCACGCAT GACCTGGCAC
GACGCCATGG AGCGGTATGG AACCGACCGT CCGGATACGC GCTACGGCAT GGAGTTGGTG
ACGGTGTCCG ACATCGTCCA GGACATGGGC TTCAAAGTCT TTAGTGGAGC CGTGAAGTCC
GGCGGATCGG TGAAAGTCAT CGCCGTCCCT GGAGGCAACG ATGCCCTGTC GAACGTTCGG
ATCAAACCTG GTGGGGATGT CTTCAGCGAA GCGCAAGCTG CTGGTGCGGG GGGCTTGGCC
TTTATTCGTG TCCGCGACGG CGGCGAAATC GACACCATTG GTGCGATTAA GGACAACTTG
TCGGACGAAC AGAAAGCCGA ATTGTTGAAG CGAACCGGCG CGACCCCGGG CACCCTCTTG
CTGTTTGGAG CTGGCGAAAC CGCCATCGTG AACAAAGCGC TCGACCGGGT GCGGCAGTAC
CTGGCAAAGG AACTCAACCT GGTGAAACCC GACCGGCAAA ACGACGCCTG GAACTTCCTC
TGGGTCGTTG ACTTTCCAAT GTTCGAGTTC AACAGCGATG AAAACCGATA TGAAGCCCTG
CACCATCCGT TCTGCGCCCC CAACACCGAC GACCTGGGCA GTGATCCAGC GCAATGGGCA
ACGACCCTCC CCAAAGCAAG AGCGCAGGCC TACGACCTTG TGTTGAACGG TCTTGAGCTC
GGCGGCGGCT CCCTACGCAT CCACGACTCC GCCCTACAAC GCCAAGTGCT GCAAACCGTG
GGATTACCCC TGGAAGAAGC CCAAGCGCAA TTTGGCTTCT TGATTAACGC GCTCGATATG
GGCGCTCCCC CCCACGGTGG CCTTGCCTTT GGTGTGGACC GGATGGTGAT GTTGCTGGCC
GGAGAAGATT CGATCCGCGA CACCATTGCA TTCCCGAAAA CCCAACAAGC CCGCTGCCTG
ATGACCGACG CCCCCAGCAG CGTTGCCGAA AAACAGCTGC AGGAGCTCCA TGTGTCGAGC
ACCTGGGTGG ATCCCGCCGA GGATGAAAAC TGA
|
|---|
| Protein sequence | MRSNGCGDLR KDSIDAVVQL CGWVDRRRDH GGVIFIDLRD RSGTVQITVD PDLGAEAFAV
AEHLRSETVL QVHGKVRARP AESLNDKLAT GAVEVLASEI VVLNKVTGNL PFPVSVHDEE
NTREELRLRH RYLDLRRKRM NDNLRLRART IQAARRFLED EGFIEVETPV LTRSTPEGAR
DYVLPSRVCG GDWFALPQSP QLFKQLLMVG GIERYYQVAR CFRDEDLRAD RQPEFTQLDI
EMSFMGEEQI LQLNEDLICA IWKSVKGIEL PRPFPRMTWH DAMERYGTDR PDTRYGMELV
TVSDIVQDMG FKVFSGAVKS GGSVKVIAVP GGNDALSNVR IKPGGDVFSE AQAAGAGGLA
FIRVRDGGEI DTIGAIKDNL SDEQKAELLK RTGATPGTLL LFGAGETAIV NKALDRVRQY
LAKELNLVKP DRQNDAWNFL WVVDFPMFEF NSDENRYEAL HHPFCAPNTD DLGSDPAQWA
TTLPKARAQA YDLVLNGLEL GGGSLRIHDS ALQRQVLQTV GLPLEEAQAQ FGFLINALDM
GAPPHGGLAF GVDRMVMLLA GEDSIRDTIA FPKTQQARCL MTDAPSSVAE KQLQELHVSS
TWVDPAEDEN
|
|---|
| |