Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2209 |
Symbol | |
ID | 3742212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 2118895 |
End bp | 2119683 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637772408 |
Product | membrane protein, multidrug efflux associated |
Protein accession | YP_378210 |
Protein GI | 78185776 |
COG category | [R] General function prediction only |
COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGCGGT ACTGGCAAAC ATTGCGGCGT TTCTGGGGCA CGGCCGTCGC GGTGCAGTTG GAGTATCAAG CCAATGTGCT GATTGAGCTG CTGGCGGTGG CCATGAGCCT CAGCGGCAGT CTGTTTTTGC TCTCGTTGTT CTATGGCCCC GATCAGACCC TTGGGGGCTG GAGCTGGGCC CAGGCCCTGA TGGTGCAGGG TCTCTACACC GTGTTTGACG GCATGGCCAC CACCTGGCTG CGCCCAAACC TCGGCGCGAT CGTCACCCAT GTGCGCGAGG GCACCCTGGA TTTCGTACTG CTCAAGCCGA TCGATAGCCA GTTCTGGCTC TCGTTGCGCA CGCTCTCTCC GGCGGGGCTC CCGGAGATTG GCCTGGGGCT GGCGCTCCTG ATCTGGGGCA GCCTCCAGGC AGGGGTGGTG CTCAGCCTGC CTGCACTGCT GACCGTGTTG GTGATGGTGC TGGCCGGGGG CGTGATCTTG TACTCCCTGT GGTTCCTGAT CGCCGCCACC AGCATTTGGT TTGTCAAAAC CTGGAACGCC ACAGAGGTGC TACGGGCCGT GTTGGCTGCG GGGCGATATC CACTCAGTGC CTATCCAGCC ACGCTGCGGT TGCTGTTCAC GTTTGTGTTG CCAGTGGCCT TTCTCACCAC GGTTCCGGCG GAGCTGTTGC TGGGTCGTGT TGCAGCACCG ATGCTGTTGT TGGGTTTGGC TCTCGCCTGT GGCTTCTTCG TTTCGGCGAG GGCGTTCTGG TTGTTTGCTT TGCGTCACTA CACCTCTGCC TCGAGTTGA
|
Protein sequence | MRRYWQTLRR FWGTAVAVQL EYQANVLIEL LAVAMSLSGS LFLLSLFYGP DQTLGGWSWA QALMVQGLYT VFDGMATTWL RPNLGAIVTH VREGTLDFVL LKPIDSQFWL SLRTLSPAGL PEIGLGLALL IWGSLQAGVV LSLPALLTVL VMVLAGGVIL YSLWFLIAAT SIWFVKTWNA TEVLRAVLAA GRYPLSAYPA TLRLLFTFVL PVAFLTTVPA ELLLGRVAAP MLLLGLALAC GFFVSARAFW LFALRHYTSA SS
|
| |