Gene Syncc9902_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2201 
Symbol 
ID3742986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp2112721 
End bp2113242 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content56% 
IMG OID637772400 
Producthypothetical protein 
Protein accessionYP_378202 
Protein GI78185768 
COG category[S] Function unknown 
COG ID[COG4803] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATT TGATTGTGAT CGGTTTCCCC AACGTGGAGG AAGCCGAACA GGTTCGTCGA 
GAGTTGGTCA CGATCCAGCA GCAGCACTTG ATCGCGCTTG AAGACGCCTG TGTTTTGGAA 
CATGGCGAGG ATGGCCATGT TCATTTGAAA CAAGCGATCA ACCTTGCAGC AGCAGGGGCG 
GCGAGCGGCA GTTTTTGGGG GATGTTGATT GGCTTGCTGT TCCTCAACCC GTTGGTGGGC 
TTGGCTGTGG GGGCTGGTGC CGGAGCGGCA TCAGGTGCAT TGAGCGATAT CGGCATCAAT 
GATCAGTTCC TAAAAGAACT GGGTGAAACC TTGCCGAAGG GCAGTGCTGC TCTGGCACTA 
CTTGTGCGTG AGGGAACCCC TGACCGTGTG GTGGAAAGTT TGCGCAGTCA TGCTCCCCAT 
GCCCGGCTGG TCAAGACCAG CCTCAGCCAT GTCGATGAGG ACAAATTGCG GGAACTGATC 
AAAACATCAG CCCAACAAGC TGAGGCCCTT CGTCTCGCCT GA
 
Protein sequence
MSDLIVIGFP NVEEAEQVRR ELVTIQQQHL IALEDACVLE HGEDGHVHLK QAINLAAAGA 
ASGSFWGMLI GLLFLNPLVG LAVGAGAGAA SGALSDIGIN DQFLKELGET LPKGSAALAL 
LVREGTPDRV VESLRSHAPH ARLVKTSLSH VDEDKLRELI KTSAQQAEAL RLA