Gene Syncc9902_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2192 
Symbol 
ID3742977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2100902 
End bp2101825 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content59% 
IMG OID637772391 
Productstearoyl-CoA 9-desaturase 
Protein accessionYP_378193 
Protein GI78185759 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCGAG CGCCATCTCC ACCGAGCCGG CCGGTCACGT CTCACAAGGC TTTAAAACGT 
GCTGGCTTAC TCCACGTGCG TCGCAAAGGG GGGCGATCCG CAGCTCCCTC CCAAAGCCCA
CGCAGGGGAA CCATCGTGTT CATGGTGGTC TTGCATACCT CCGCGATGGT GGCTCTACTG
CCGCGTTTCT GGAGCTGGCA AGCCGTTCTC ACCCTCGGCA TTTTGTACTG GGCTACAGCC
TGCCTCGGAG TCACGATCGG TTACCACCGA CTGCTGTCTC ACCGGTCGTT TCGGGTTCCC
AAATGGTTGG AGCGATTTTT CGCCACCTGC GGTGCCTTGA GCTGCCAGCA AGGGCCGATC
ACCTGGGCCG GTCTGCATCG CCACCACCAC AAGTTTTCCG ACACGGACGC GGATCACCAC
AACAGCCATC GAGGCTTCTG GTGGAGCCAT ATGGGCTGGA TGTTTGAAAC GATTCCTGCC
ATGCAGGCAA TCCCGCGCCT CAGCGGCGAC CTCAGCAGCG ATCCCTATTA CCGCTGGCTC
AACCGCAATT TTCTTTACCT GCAATTTCCT CTGGCGTTTC TGCTGTTTGT GATCGGCTCC
ATCACTGGCG CTGGAGGGTG GGCCTTAGTG CTTTGGGGCA TCCCCTTAAG ACTCGTGCTC
GTTTATCACG TGACCTGGCT TGTGAACTCC GCAACGCACT GCTGGGGAAC CATTGCCTAC
GACAGCGGCG ATGCTTCCCG CAACAACAAA TGGGTGGCGG CCCTCACCTT TGGCGAGGGT
TGGCATAACA ACCATCACGC CTTCCCTCAC TCCGCATGCC ACGGACTCCA GAAAGGACAG
ATCGACCTCA CCTGGGAACA TATCCGCTTG ATGCGAGCTC TCGGGCTGGC CAAAAACATC
CGCCTACCCA TCAAGCCTGC ATAA
 
Protein sequence
MNRAPSPPSR PVTSHKALKR AGLLHVRRKG GRSAAPSQSP RRGTIVFMVV LHTSAMVALL 
PRFWSWQAVL TLGILYWATA CLGVTIGYHR LLSHRSFRVP KWLERFFATC GALSCQQGPI
TWAGLHRHHH KFSDTDADHH NSHRGFWWSH MGWMFETIPA MQAIPRLSGD LSSDPYYRWL
NRNFLYLQFP LAFLLFVIGS ITGAGGWALV LWGIPLRLVL VYHVTWLVNS ATHCWGTIAY
DSGDASRNNK WVAALTFGEG WHNNHHAFPH SACHGLQKGQ IDLTWEHIRL MRALGLAKNI
RLPIKPA