Gene Syncc9902_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2179 
Symbol 
ID3742671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2084688 
End bp2086070 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content57% 
IMG OID637772377 
Productputative putative integral membrane protein 
Protein accessionYP_378180 
Protein GI78185746 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGA CCGTGACGGA TTTCAACTCT AAGAAGGCCG TTGGCTCCGA TGACGCAGAA 
GATGGCAGAA ATCGCTTGTT CTTTATGGCG TCATCGACGC TGCGTCAGAG CATTGGTCCG
GGGATTTTGC TGGCCGGTGC CTGTATTGGT GGATCTCACC TCATGTCGTC CACCACAGCA
GGAGCGCGGT TTGGCTTTGC GCTGGTGCTG TTGATTCTGC TGATCAATTT GATCAAGTAC
CCGTTCTTGC GAGTGGGGAC GCGGTTTACT GCTGCGACGG GGCTGTCGTT GTTGGAAGGA
TTCCAGCGGC GCAATAAGGC CTATCTCCCC CTTTATCTCC TGGTGAGTTT GGTCACCGGT
ACGGCCACGA TCGCGGCTGT GAGCTTCGTG GCTGGTCTGT TGCTCACCAA TGTGCCTGGT
TTAACGGGGT GGGATCCCTA TGGCCTCTCG ATCGGTGTGC TGGTGGTGAG TGGACTGATT
TTGTTGCTGG GTCATTACAA AGCTCTGGAT CGTTTGTCCA AGCTGTTGGT GGCCTTGCTC
ACGCTTCTCA CAGGTGTAGC GGCGGTGTCG TTGCTGATTC GCGGCCCTGT TGGTGACGTG
GCTGCAAGTT GGGTTGCAAC AGATCCCAGC CCGTGGACGC TGGCGAATTT GGCGTTTCTG
ATCCCCTTGA TGGGTTGGAT GCCAGGACCG GTGGAGATGT GTGTGTGGCC ATCGCTGTGG
ATGTTTTCCC GTGCTCGCGA CACTGAGCAC ACCGCTAGCC CTGCGGAAGC GGAATTCGAC
TTCAACCTTG GCTATGGCGT CACGGTGGTG ACGGCCTTGT TTTTCATCAC GCTTGGCGCC
TACACGATGT ATGGCACAGG CGATGGAATG CTTGCCGGCA GCGGGGTGTC CTTTGCCCAG
AAGCTGATCA AGCTCTACAC CGCAGCCATG GGTGGTTGGG CGGCTTGGGT GATCATTCCA
GCTGCGTTCT CGGCGATGTT CAGCACCACG ATTACCTGCC TCGACGCCTA CCCCCGCAGC
ATCGGAGCGA TTCAGGGCCT TTTGACTGGC CAAGACAGCG GCGATGCAGC TCCGGGTCCG
CAGCGTCGTC GTTTTCAGTT GTGGGTGGTG ATTCACCTGC TGGTTGCGGT TGTGGCCTTG
GTGGTGGCAA AAAGCGGCGG CATTGGTGTG AAGGACTTCG TGTTCGGCGC GATGACCGGC
AGTTTCCTTT CCGCTCCTTT GTTCGCCTGG ATGGCGATGG ACACGATCAA CAGCAGTCTG
GTTCCGGTTG AGCATCGTTA TGGCCCGGTG ATGCGCGGCT TGTGTTGGTT TGGCTTGCTG
TTCTTTCTTG TTTTCAGTCT GTTGTTTGTG GCGAGTGCCT TTTTTGGGGT TGGTGCCTCA
TAA
 
Protein sequence
MKPTVTDFNS KKAVGSDDAE DGRNRLFFMA SSTLRQSIGP GILLAGACIG GSHLMSSTTA 
GARFGFALVL LILLINLIKY PFLRVGTRFT AATGLSLLEG FQRRNKAYLP LYLLVSLVTG
TATIAAVSFV AGLLLTNVPG LTGWDPYGLS IGVLVVSGLI LLLGHYKALD RLSKLLVALL
TLLTGVAAVS LLIRGPVGDV AASWVATDPS PWTLANLAFL IPLMGWMPGP VEMCVWPSLW
MFSRARDTEH TASPAEAEFD FNLGYGVTVV TALFFITLGA YTMYGTGDGM LAGSGVSFAQ
KLIKLYTAAM GGWAAWVIIP AAFSAMFSTT ITCLDAYPRS IGAIQGLLTG QDSGDAAPGP
QRRRFQLWVV IHLLVAVVAL VVAKSGGIGV KDFVFGAMTG SFLSAPLFAW MAMDTINSSL
VPVEHRYGPV MRGLCWFGLL FFLVFSLLFV ASAFFGVGAS