Gene Syncc9902_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2177 
Symbol 
ID3742669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2083498 
End bp2083977 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID637772375 
Producthypothetical protein 
Protein accessionYP_378178 
Protein GI78185744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATGGG ACCCCCCTTG GTTAATTGCG AGCCAACAGG CCCTGGTGGC ACAGCTGCTG 
CAGTCCCACC AACGGGCCTT CGGCCGGCCA CTGATCTCCG CAGCCCAACC TGGTTCCTCG
AAGCAGTTGA TCTGTCAGGA ACTGTTCGCC TGTGGGTTCC CTGTGCTGGC CCATGACGGC
AGTCCAGAGC CGAAGCTCAC CTATGCCAAT GCCGCTGCCT TAGGCCTATG GGATGCCCCA
TGGGACGACC TGATGGGACT GCCATCACGG CTTACCGCAC CAACCGCCGA ACAGGCCGAA
CGCTCCCTTG CCCTCAGCAA AGCCAAAAGT GAAGACGCCA TCGAGGGTTA CAGCGGAATC
CGCATCAGCC GCAAGGGACG ACGATTCATG ATTCAAAACG CCCGAATCTG GACCCTTTGG
GATCAACACC AACACGCCTG TGGGCAAGCC GCGAGCTTCA GCAATTGGTG GTGGATTTAA
 
Protein sequence
MQWDPPWLIA SQQALVAQLL QSHQRAFGRP LISAAQPGSS KQLICQELFA CGFPVLAHDG 
SPEPKLTYAN AAALGLWDAP WDDLMGLPSR LTAPTAEQAE RSLALSKAKS EDAIEGYSGI
RISRKGRRFM IQNARIWTLW DQHQHACGQA ASFSNWWWI