Gene Syncc9902_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2176 
Symbol 
ID3742668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2082568 
End bp2083473 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content59% 
IMG OID637772374 
Producthypothetical protein 
Protein accessionYP_378177 
Protein GI78185743 
COG category[S] Function unknown 
COG ID[COG4279] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAA ATTCGAACAC CAACAGCGGC ATCACTGCCA TTGGCGATGA CGGCTTAGGG 
CAACAGCCCT GGTGGGTTGA GCAATGGATG GAGCTGATTA ACGGCTACCG ATTTAAGAAA
CGACTCGAAC GGGCCTGGGG CTATGCCCGC GAGGGCAACG TCACCTCCAT TCGCTTCGAG
GGACGCCGAG TGCATGCGCG GGTGCAGGGC ACCGATGAAG AGCCCTACAA AGTGAAGCTT
TGGCTCGATG TTCTCAATGA TGAGGACTGG GGCTATGTGC TCGAGGCACT CACCCAAAAA
GCACGCTGGT CCGCTCAACT GTTGGCTGGG ATCATGCCGT CCGACATCGA ACGGGCCTTT
GCTGCCAGTG GTAAGCGCCT GTTTCCGTTC AAACTTCAAG AGGTGCGCAG CGAGTGCAGC
TGCCCAGACA AGGCCAACCC CTGCAAGCAC ATCAGTGCGG TGTACTTCCT GATGGGGGAT
CGCTTCAGCG AGGACCCCTT CGTGCTGTTC CAGCTCCGAG GACGCAATCG CTCAAAGCTG
CTAGAGGACC TAGCCGAAAA ACGGCGTAAA GCGCTAGCGG CCATGGTGAA AACCAAAGCC
ATTGGCAAGC AAAAAGCCGC CTCCATTTCA AAAAAGGCTC CTGAGGAAAC GGCAGCCATT
CCCCCCCATC CAGCCGTGCT GGATCCTGGG CTTTGGTGGC ATTACAACCG CAGCCTCGAC
GGCGATCTGG TGGTGGTGAC GGCGGCACTC GAAGGGGACA CTGGCCTCGA TGCCGCGGGT
GAATTGCCCC TGGCTGAAGA TCCGCGATTT CCAGAGGCCC GCGACACGTT CCTTGGCAAC
CTCAAAGCCC ACGGCCAAGC CAGTGCCCAA CGGGCGATGC TGCAAGCCAT GGCAGCAGGC
AGCTGA
 
Protein sequence
MNSNSNTNSG ITAIGDDGLG QQPWWVEQWM ELINGYRFKK RLERAWGYAR EGNVTSIRFE 
GRRVHARVQG TDEEPYKVKL WLDVLNDEDW GYVLEALTQK ARWSAQLLAG IMPSDIERAF
AASGKRLFPF KLQEVRSECS CPDKANPCKH ISAVYFLMGD RFSEDPFVLF QLRGRNRSKL
LEDLAEKRRK ALAAMVKTKA IGKQKAASIS KKAPEETAAI PPHPAVLDPG LWWHYNRSLD
GDLVVVTAAL EGDTGLDAAG ELPLAEDPRF PEARDTFLGN LKAHGQASAQ RAMLQAMAAG
S