| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2175 |
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| Symbol | |
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| ID | 3742667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 2079374 |
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| End bp | 2082565 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637772373 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_378176 |
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| Protein GI | 78185742 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGC TGCACGCCAC CTGGCTTCCC GCCATTCGTA CTTCCAGCAG TTCCGGACAG
CCGGCACTGC TCATTTGGGC TGACACCTGG CGTGTCGCCT CACCGGAGGG GCCCGGACTC
ACACCCGCTC TGCATCCCTT CACCCTTGGC TCGGACGATC TCAAAGCTTG GTTGACCGAA
CGGGACCTGA TGCCTGGGGG CAGCATCGAT GCCACCGCCT GCCTCACCCT CCCAAGCCGC
AGCGTCAAAC CCCGCAAAAG TCGAACCCAA CCGAGCGAAC CAGCCCCAGA GGGACCGGCC
TGGACCGGAT TGCCAATGCA AGCAGGAGAG CCCATTCCGA AGCAAATGGA ATGGTGGCCC
TGGCAGGTAC AAGGCCTCGC GGTGGAGCCA TCGGCCGCAA CGGAATGGCT CGCCCGTTTA
CCCCTATCGG GCCGACATCC AGACCTCGGA GATGAATTGC GCTGGTGGAG CCATCTCCAA
CGTTGGTCCC TCAGCTTGGT GGCCCGGGGG CGCTGGATTC CCCAGATGGA ATTAAGCAAA
GGCGAGGGTT ACCCCCACCG AGCGCGCTGG GTTCCCTTGT TGAACCGTGA GGAAGATCGA
CGACGGCTCG AAGACCTCGC GGCCACGCTG CCCCTCGTGG CGACCTGTGC CCTCCCTTGG
CGTGAGCCAC TTGGACGCCG TAGCAACCGC ACCACCAGGC TTCGACCGGA AGCGATGCGA
GCCGCCAACC CGGTGGCTTG CTGCCGCCCC CGGAGCGGTC GCCTCAGGGT GGCCACCTTG
CTTGAAGACT TGGTGGATGC AGAGCTGCGC AAGGGATTTG AACCCACCAC AGAGGGGCTC
GACCCCCTAC TCACCCTGTG GCAAGAGGCC CTGGCCTCAG AAACCGGTGT TGTGGAGGTG
GGCAACGAGG ATGCAGAACG CCTTACCGCG GCAAGCCTGC ACTGGCGCGA AGGGATTGCC
GGAGGCTTCG CTGCTGCCCG CACCTGCCTC GAACTAAACA CCCCAAACGA AGGCGAAGAA
CTCTGGGACC TGAAGTTTGG CTTGCAAGCG GAGGCCGATC CCAGCCTCAA GCTGCCGGCC
GCCGCGGCCT GGGCCTCAGG AGCCGAAACA CTCCAGCTCG GGGAGATCAA AGTTGACCAG
GCGGGGGAAG TGCTGCTGGA GGGTCTTGGC CGAGCCCTCA CGGTGTTCCC TCCGATCGAA
CGCGGACTGG AAAGCGCAAC GCCAGAAACG ATGCAGCTCA CGCCAGCGGA GGCGTTTGTC
TTGGTGCGAA CAGCAACGCA CCAGCTCCGC AATGCCGGCA TCGGCGTCGA ACTGCCCCCC
AGCCTTTCAG GGGGCCTCGC CAGCCGGCTT GGTTTAGCCA TCAAGGCAGA TTTACCAGAT
CGATCCAGCG GCTTCACCCT CGGAGAATCT CTGGACTGGA GCTGGGATCT GATGATCGGC
GGCGTCACAC TCACCCTGCG AGAGCTCGAA CGGCTCAGCG GTAAGCGCAG TCCGCTTGTG
CGCCACAAGG GAGCCTGGAT CGAACTGCGA CCCAACGATC TCCGCAACGC CGAACGCTTC
TGTGGAGCCA ATCCAGAACT GAGCCTCGAC GATGCCCTAA GGCTCACGGC CACAGAAGGG
GAGCTAATGA TGCGCTTGCC GGTGCATCGC TTTGATGCGG GGCCTCGGCT TCAGGGAGTT
CTCGAGCAAT ATCACCAGCA AAAAGCCCCC GATCCCCTTC CCGCTCCAGA GGGATTTTCC
GGACAACTGC GTCCTTATCA AGAACGTGGC TTGGGCTGGC TGGCCTTCTT ACATCGCTTC
GATCAAGGCG CCTGCCTGGC GGACGACATG GGCTTGGGCA AGACCATCCA ATTGTTGGCC
TTCCTGCAGC ACCTCAAAGC CGAGCACGAA CTCAAACGCC CGGTGCTGTT GGTGGCCCCA
ACCTCGGTGC TCACGAATTG GCGACGGGAG GCGGAAGCCT TCACCCCCGA GCTGTCGGTG
AAAGAGCACT ACGGCCCACG CCGGCCTTCC ACGCCGGCCG CCTTGAAAAA AGAACTCAAA
GATGTGGATC TGGTGCTCAC CAGTTACGGC CTGATGCAAC GCGACAGCGA GCTGCTGGAC
AGCGTCGACT GGCAAGGGGT TGTGATCGAC GAAGCGCAGG CGATCAAAAA CCCTGGGGCG
AAACAAAGCC AAGCAGCCCG AGACCTGGCC CGAGCTGGAA AGAGCAGCAG GTTCCGCATC
GCACTCACCG GCACACCGGT GGAAAACCGC GTCAGCGAGC TGTGGGCGCT GATGGATTTC
CTCAACCCAA AGGTGTTGGG AGAGGAAGAC TTCTTTCGTC AGCGCTACCG CATGCCAATT
GAGCGCTACG GCGATATGTC GTCGTTACGC GATCTCAAAG CGCGGGTCGG CCCCTTCATC
CTGCGCCGTC TCAAAACCGA CAAGTCGATC ATTTCCGACC TGCCTGAAAA GGTGGAGCTC
AGTGAATGGG TGGGTCTCAG CAAAGAACAG AAATCGCTGT ACAACAAAAC CGTTGAAGAC
ACCCTCGACG CCATTGCCAC CGCACCGCGG GGGCAACGCC ATGGCCAGGT GCTAGCCCTC
TTGACCCGGT TAAAGCAGAT TTGCAATCAC CCGGCTTTAG CCCAACGCGA AGGGGCCGTT
GACAGCGAAT TCCTTGGCCG TTCCGCCAAG CTGATGCGAC TCGAAGAAAT CCTCGAAGAG
GTGATTGAAG CCGGCGATCG CGCTTTGCTA TTCACCCAAT TCGCCGAATG GGGGCATCTC
CTGCAGGCCT GGATGCAACA ACGCTGGAAG TCTGAGGTTC CCTTCCTGCA CGGCGGAACC
CGCAAGAGTG ATCGGCAAGC GATGGTGGAT CGATTCCAAG AGGACCCCCG GGGACCTCAA
CTCTTTCTTC TGTCCCTCAA GGCCGGTGGT GTAGGCCTCA ACCTCACCCG GGCCAGTCAT
GTGTTCCACG TCGATCGCTG GTGGAATCCA GCGGTGGAAA ACCAAGCCAC CGACCGGGCC
TATCGAATTG GTCAAACCAA CCGGGTAATG GTGCACAAAT TCGTCACCCG TGGCTCGGTG
GAAGAAAAAA TCGACCAAAT GATTCGTGAA AAAGCTCGAA TGGCTGAAGA CGTGATCGGC
TCCGGTGAAG ACTGGCTCGG GAGCCTTGGC GGCGATCAGC TGCGCAATCT TGTTGCCCTC
GAGGACACCT AA
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| Protein sequence | MSLLHATWLP AIRTSSSSGQ PALLIWADTW RVASPEGPGL TPALHPFTLG SDDLKAWLTE
RDLMPGGSID ATACLTLPSR SVKPRKSRTQ PSEPAPEGPA WTGLPMQAGE PIPKQMEWWP
WQVQGLAVEP SAATEWLARL PLSGRHPDLG DELRWWSHLQ RWSLSLVARG RWIPQMELSK
GEGYPHRARW VPLLNREEDR RRLEDLAATL PLVATCALPW REPLGRRSNR TTRLRPEAMR
AANPVACCRP RSGRLRVATL LEDLVDAELR KGFEPTTEGL DPLLTLWQEA LASETGVVEV
GNEDAERLTA ASLHWREGIA GGFAAARTCL ELNTPNEGEE LWDLKFGLQA EADPSLKLPA
AAAWASGAET LQLGEIKVDQ AGEVLLEGLG RALTVFPPIE RGLESATPET MQLTPAEAFV
LVRTATHQLR NAGIGVELPP SLSGGLASRL GLAIKADLPD RSSGFTLGES LDWSWDLMIG
GVTLTLRELE RLSGKRSPLV RHKGAWIELR PNDLRNAERF CGANPELSLD DALRLTATEG
ELMMRLPVHR FDAGPRLQGV LEQYHQQKAP DPLPAPEGFS GQLRPYQERG LGWLAFLHRF
DQGACLADDM GLGKTIQLLA FLQHLKAEHE LKRPVLLVAP TSVLTNWRRE AEAFTPELSV
KEHYGPRRPS TPAALKKELK DVDLVLTSYG LMQRDSELLD SVDWQGVVID EAQAIKNPGA
KQSQAARDLA RAGKSSRFRI ALTGTPVENR VSELWALMDF LNPKVLGEED FFRQRYRMPI
ERYGDMSSLR DLKARVGPFI LRRLKTDKSI ISDLPEKVEL SEWVGLSKEQ KSLYNKTVED
TLDAIATAPR GQRHGQVLAL LTRLKQICNH PALAQREGAV DSEFLGRSAK LMRLEEILEE
VIEAGDRALL FTQFAEWGHL LQAWMQQRWK SEVPFLHGGT RKSDRQAMVD RFQEDPRGPQ
LFLLSLKAGG VGLNLTRASH VFHVDRWWNP AVENQATDRA YRIGQTNRVM VHKFVTRGSV
EEKIDQMIRE KARMAEDVIG SGEDWLGSLG GDQLRNLVAL EDT
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