Gene Syncc9902_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2168 
Symbol 
ID3742660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2070005 
End bp2070838 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content56% 
IMG OID637772366 
Productprolyl 4-hydroxylase, alpha subunit 
Protein accessionYP_378169 
Protein GI78185735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCTA CCCGCGCCAT TCCGAAGGCC TGGCGCCAGT GGCTCATTCA CAACCGTGAT 
CGTGGATGTG CGCGTCAGGA GATTGTTGAC CGCGCCGTCG CCCAGGGATA TTCCTTGGTG
GCGATCAATG CTGTGCTCGA GACCCCTGCT CAGCACGGAG CTGCACTGAT CTCGTCCGAT
GGGTTGAAGC CGCCAGCGTG GTTGCAGTGG TTCAACGCGC CGATCACGGA TTCGCAGCAT
CGGCCCCGTG CTGTTCGTGT GGAAACCCCC CACGCCCAGC TGTATGAACT GCCGTCTTTG
CTGTCGTCTC TGGAATGCCA AGAGTTGATT GAGGCGATCA ACTCGGCGTT ATTGCCGTCC
ACTGTGACCC GTGGCAGCAA CGACTACCGC ACCAGTCGCA CGTGCCATCT GCGTCATAAC
CATCCCGTGC TGTCTCGCCG CTTGGATCAA CGCTTTGCGG ATTTGTTGGG GGTTGATCCA
CGCTTTTCGG AACCCATTCA GGGGCAGCGA TATGACCCGG GTGAGTATTT CAAGCAACAC
ACTGATTGGT TCTCACCTGG CACGAAAGAG TTTGATCACA ACACCAGGAA TGGTGGGCAG
CGAACCTGGA CGGTGATGGT GTATCTCAAT GCCGTGGAAT CGGGCGGTGA GACGTGGTTT
CAACATCTGG ATCAACGTTT TACGCCGCGA CCGGGTTTGG GTTTGGCTTG GAACAATCTT
CAAGAAGATG GAACCCCAAA CCGGAACACA TTGCATGAAG CCATTCCGGT TGCTGTTGGA
AGCAAATGGG TGATTACAAA GTGGTTCCGA GAAAGGACGG GGCGAAATGG TTAG
 
Protein sequence
MTSTRAIPKA WRQWLIHNRD RGCARQEIVD RAVAQGYSLV AINAVLETPA QHGAALISSD 
GLKPPAWLQW FNAPITDSQH RPRAVRVETP HAQLYELPSL LSSLECQELI EAINSALLPS
TVTRGSNDYR TSRTCHLRHN HPVLSRRLDQ RFADLLGVDP RFSEPIQGQR YDPGEYFKQH
TDWFSPGTKE FDHNTRNGGQ RTWTVMVYLN AVESGGETWF QHLDQRFTPR PGLGLAWNNL
QEDGTPNRNT LHEAIPVAVG SKWVITKWFR ERTGRNG