Gene Syncc9902_2157 details

Gene Information

• Locus tag: Syncc9902_2157
• Symbol: nusG
• ID: 3742041
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: -
• Start bp: 2057385
• End bp: 2058053
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637772355
• Product: transcription antitermination protein NusG
• Protein accession: YP_378158
• Protein GI: 78185724
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.325374
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCGACG ACTTGACCAC ACCGGACGCC CTTGAGGTGA TCGATCTGCC GGCCCCGAAT 
GATGGGGAAG ACGGAACGCT TGCGATGGAG CCTGTCGCGA ATACCGCTAT TGCTCGGTGG 
TATGCGGTTC AGGTGGCCTC GAGTTGTGAG AAAAAAGTGA AAGCCACCCT TGAACAACGG 
GCGGTCACCC TTGGGGTGAG CAATCGCATT CTTGAGATCG AGATTCCTCA AACGCCGGCG 
ATCAAGCTGA AAAAGGACGG CAGCCGTCAG TCCACTGAGG AGAAGGTGTT TCCCGGCTAT 
GTGCTCGTCC GGATGGTGCT GGATGAAGAC ACGATGATGG CGGTGCGCAG CACGCCCAAC 
GTGATTAATT TCGTTGGTGC TGAGGATCGA CGCGCAACCG GAAAAGCCCG GGGCCACATC 
AAACCTCGCC CGCTTAGCCG TTCAGAGGTG GATCGCATCT TTAAGCGCGC TGCCGAGAAG 
AAAACCGTCG TCAAGGTCGA CTTGGCCGAA GGCGATCAGA TCCTTGTTAC CGCTGGTCCG 
TTCAAAGACT TCCAAGGGGA AGTGATTGAG GTGTCAGGCG AGCGCAACAA GCTCAAGGCA 
TTGCTGTCCA TTTTTGGACG GGAAACGCCA GTTGAACTGG AGTTTTCACA GATCAGCAAG 
CAGAACTGA 

 

Protein sequence

MPDDLTTPDA LEVIDLPAPN DGEDGTLAME PVANTAIARW YAVQVASSCE KKVKATLEQR 
AVTLGVSNRI LEIEIPQTPA IKLKKDGSRQ STEEKVFPGY VLVRMVLDED TMMAVRSTPN 
VINFVGAEDR RATGKARGHI KPRPLSRSEV DRIFKRAAEK KTVVKVDLAE GDQILVTAGP 
FKDFQGEVIE VSGERNKLKA LLSIFGRETP VELEFSQISK QN