| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2155 |
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| Symbol | rplA |
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| ID | 3742039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 2056058 |
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| End bp | 2056765 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637772353 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_378156 |
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| Protein GI | 78185722 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.243526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCAAAC TTTCAAAGCG CTTGGCTGGC TTGGCCAGCA AGATCGAGGA TCGTACCTAC
GGGCCCCTCG AGGCGATTGC TCTCGTAAAA GACAACGCCA ACGCCAAATT TGACGAAACG
ATGGAAGCCC ACGTGCGGCT TGGCATCGAT CCCAAATACA CCGACCAGCA ATTGCGCACC
ACGGTTGCCC TGCCCAACGG CACGGGTCAG ACCGTTCGCA TCGCTGTCGT CACCAGTGGT
GAAAAGGTGG CTGCCGCTAA AGCCGCTGGC GCCGAACTCG CTGGCGATGA AGATCTAGTG
GAAGCGATCA GCAAGGGAGA AATGAATTTC GACCTCCTGA TTGCCACTCC AGACATGATG
CCCAAGGTGG CCAAACTCGG CCGTGTGCTG GGTCCGCGTG GTCTGATGCC GAACCCAAAA
GCTGGAACGG TGACCACCGA TCTCGCGGCT GCGATTAAAG ACTTCAAGGC GGGCAAGCTC
GAGTTCCGAG CCGATCGCAC CGGCATCGTC CACGTTCGTT TTGGTAAGGC CAGCTTCACC
GCGGATGCCC TGCTCGAGAA CCTCAAGACG CTGCAAGAAA CGATCGATCG CAACAAACCC
AGTGGCGCGA AGGGGCGTTA TTGGAAAAGC TTGTACGTGA CATCCACAAT GGGCCCCTCC
GTCGAGGTTG ATTTCTCGGC CCTTCAGGAG ATTGGTCAAG AGGGCTAA
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| Protein sequence | MPKLSKRLAG LASKIEDRTY GPLEAIALVK DNANAKFDET MEAHVRLGID PKYTDQQLRT
TVALPNGTGQ TVRIAVVTSG EKVAAAKAAG AELAGDEDLV EAISKGEMNF DLLIATPDMM
PKVAKLGRVL GPRGLMPNPK AGTVTTDLAA AIKDFKAGKL EFRADRTGIV HVRFGKASFT
ADALLENLKT LQETIDRNKP SGAKGRYWKS LYVTSTMGPS VEVDFSALQE IGQEG
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