Gene Syncc9902_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2140 
Symbol 
ID3741927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2041574 
End bp2043214 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content62% 
IMG OID637772338 
ProductATPase 
Protein accessionYP_378141 
Protein GI78185707 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTCA GTGCTGGTCC TTCCGTCTCC CCGTCCGTCC TCGATATGGC ACGGCCAGTT 
TTGGAGCTCA ATCAGCTGAA GTTGCGGTAT CCGGGCAGCG ACAGTTGGAC CCTGGATGGG
CTGGATCTCT CCCTCGAAGC CGGCGAAACC CTGGCGTTGG TGGGATCGTC TGGATGTGGC
AAAAGCACTG TGGCCCGGGC GGTAATGCAG CTGCTCCCGG CAGGCACCAT CTGCGAAGGG
GGATTGAAAC TCACCGGACA AGACCCGCGC CAACTCAATC GCCCCGCCCT GCGCAGGTTG
CGCGGACAAG CGGCTGGTTT GGTGTTTCAA GACCCAATGA CACGGCTGAA TCCGCTGATG
CCCGTGGGAG AGCATCTGCT CGACACCCTG AAGGCGCATC GTTCTTCCAC GAGTGCCCAA
TGGCGCAAAA CGCGGGCGTT CGACCTATTG GAACGCGTTG GCATCGGTGC CCAACGGTTC
CGGGCCTATC CGCATGAGCT CAGTGGAGGA ATGCGGCAAC GCTTGGCCAT CGCCCTGGCC
ATCGCCCTCG AACCGCCGCT GCTCATTGCC GACGAACCCA CCACAAGCTT GGACGTGGCC
GTGGCCGGGC AGGTGATGGC GGAGCTGAGT GGACTCTGCC GTGAATTAGG CAGTGCCTTG
CTGCTGATTA GCCATGACCT CGCCATGGCC TCCCGCTGGT GCGAACGCAT GGCGATGCTC
GATGGAGGGC GCAGGGTGGA AGAGGGCCCA AGCCGCCAAC TGCTCACGCA ACCACAATCC
TCTGTGGGAA AGCGACTTGT CGCTTCGGCC CTGGCTCGAG AAGGGGGCCA ATCCCCGGAA
CGTCCAAGCA GCGAACCCGT CCTACGGGTG GATGCGATGC GCTGCTGGCA TGGCATCGGT
GGGATGCCAT GGTCGCCGGT GTGGCTCAAA GCGGTCGACG ACGTGAGCTT TGAGCTCCTC
GCCGGCGAAA GTCTTGGAGT GGTGGGGGCT TCGGGATGCG GCAAAAGCAC CCTCTGCCGG
GCCCTCATGG GACTGAACAG CATCCGCGGA GGCCAAGTTC ACCTGCTTGG CCAAAATCTG
CTGCGCTTGC GTGGGCCGTC ATTACGGGTT GCCAGACGGG CGATTCAAAT GGTGTTTCAA
GACCCACTGG CCTGTCTAAA TCCAGCCCTC AGCGTGGCGG ATGCCATCGC CGATCCGCTT
CTGATCCATG GCCTCTGCTC GAAGGCCGCT GCCCGGGAGC GAGCCCGAAA CCTGCTGGAA
CAGGTGGGCT TAAGTCCGGC CGATCAGTTT CAAGACCGCT TCCCAAAACA ACTCTCTGGC
GGACAGCAAC AACGGGTAGC GATCGCCCGC GCCCTGGCGC TGGAACCCAA GGTGCTGATC
TGTGATGAGA GCGTGAGCAT GCTCGACGCC GAAGTTCAAG CAGAGGTGTT GGACCTCCTG
CGGCAACTCC AACGCAAGCT TGGGCTGGCC ATGATTTTTG TAACCCACGA TCTCGCCGTC
GCCAGTGGGT TCTGCCATCG GGTGATCGTT CTCGACCGCG GCCACATCGT GGAAGAGGGG
CCAGGCGATC GCATTTTTCA GAAGCCACAA GCGGAGATCA GCCGCACCTT GGTGGACGCC
TGTCCTCGAC TACCGCGTTG A
 
Protein sequence
MVFSAGPSVS PSVLDMARPV LELNQLKLRY PGSDSWTLDG LDLSLEAGET LALVGSSGCG 
KSTVARAVMQ LLPAGTICEG GLKLTGQDPR QLNRPALRRL RGQAAGLVFQ DPMTRLNPLM
PVGEHLLDTL KAHRSSTSAQ WRKTRAFDLL ERVGIGAQRF RAYPHELSGG MRQRLAIALA
IALEPPLLIA DEPTTSLDVA VAGQVMAELS GLCRELGSAL LLISHDLAMA SRWCERMAML
DGGRRVEEGP SRQLLTQPQS SVGKRLVASA LAREGGQSPE RPSSEPVLRV DAMRCWHGIG
GMPWSPVWLK AVDDVSFELL AGESLGVVGA SGCGKSTLCR ALMGLNSIRG GQVHLLGQNL
LRLRGPSLRV ARRAIQMVFQ DPLACLNPAL SVADAIADPL LIHGLCSKAA ARERARNLLE
QVGLSPADQF QDRFPKQLSG GQQQRVAIAR ALALEPKVLI CDESVSMLDA EVQAEVLDLL
RQLQRKLGLA MIFVTHDLAV ASGFCHRVIV LDRGHIVEEG PGDRIFQKPQ AEISRTLVDA
CPRLPR