| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2136 |
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| Symbol | trmE |
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| ID | 3741923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 2035912 |
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| End bp | 2037267 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637772334 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_378137 |
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| Protein GI | 78185703 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTCCTC TCGACACCAT TGCGGCGGTT GCCACGGCTG TGGCTCCTGG CCAGGGAGGC
ATCGCTGTGA TCCGGTTGTC GGGGCCTGTG GCTGAGCAGG TTGCTCAGGC GGTTGTGCAG
TGCCCCGGTC ATCAGGAGTG GGGTAGCCAT CGGATCCTCT ATGGCCATGT GATGGCGGTT
GACGGCCAAC GTCGGTTGGA TGAGGTGCTG CTGTTATTGA TGCGCGCCCC CCGCAGTTTC
ACTGGGGAAG ACGTGGTGGA GATCCATTGC CATGGCGGAG TAATGGCTGT GCAGCAGGTG
TTGGAGAGGG TTCTGGAGCA CCCTGGGGTG CGGAGGGCTC TGCCGGGAGA GTTCAGCCAG
CGGGCGGTGC TGAATGGGCG GCTCGACCTC ACCCAGGCGG AAGCGGTGAG TGAGTTGGTG
TCGGCACGAA GTCGGCGGGC TGCCGATCTC GCGATGGCCG GACTGGACGG TGGGATTCAG
GCTCGAATCA CGGTGCTACG GGAGCGGTTG TTGGACCAGC TCACGGAGCT CGAGGCACGG
GTTGATTTTG AGGACGATCT GCCGCCGCTC GACGGAACTG CCTTGTTGAA CGAACTGCAA
GCGGTCCGAG TTGAGTTGTT GGCTTTGGTG GCGGATGGGG AGCGAGGCGA TGCCCTCCGG
CATGGCCTGC GGGTGGCATT GGTGGGTCGC CCCAACGTTG GGAAAAGTTC GTTGTTGAAT
CGCCTCAGCC GTCGGGAGCG GGCGATCGTG ACCGAACTGC CAGGCACCAC GCGCGATTTG
TTGGAGAGTG AAATCGTGCT GGATGGGGTG CCGATCACGC TGATGGATAC GGCTGGGATT
CGTGCAACGA ATGATGCCGT GGAACAGCTC GGGATCGCGC GCAGTGAGGA AGCGTTGATC
TCGGCTGATG TCGTGGTGCT GATCGTGGAT GGTCACGCCG GCTGGACCGA GACCGACGCC
CAGTTGTTGG CCCGTATTCC CAACGATGTT CCCCGCGTTG TTGTTGCGAA TAAATCTGAT
CTCGACGGTC CGCCGTTGCC GGGGCTGGTG GATGTGCAGT TCTCAGCCCT CAATGGAGCG
GGCGAAGACG CCTTCGTGCA GGTGTTGCTC GAGCGTTGTG GTGCAGGGGA TGCGGCTGGA
ATTGTGCTGT CGTTGAATAC CCGCCAGCGC GATTTAGCTT CCGTGGCTGC AGCGGCATTG
GAGCGCAGTC ACGAGGTGGC GCAGCAGCAA TTGCCTTGGG ATTTCTGGAC CATTGATCTG
CGGGAGGCGA TCCGTGGCCT TGGTGAAATC ACGGGAGAAG AGCTCACGGA GGCTGTTTTA
GAGCGTGTTT TCTCCCGTTT TTGTATCGGG AAATAG
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| Protein sequence | MPPLDTIAAV ATAVAPGQGG IAVIRLSGPV AEQVAQAVVQ CPGHQEWGSH RILYGHVMAV
DGQRRLDEVL LLLMRAPRSF TGEDVVEIHC HGGVMAVQQV LERVLEHPGV RRALPGEFSQ
RAVLNGRLDL TQAEAVSELV SARSRRAADL AMAGLDGGIQ ARITVLRERL LDQLTELEAR
VDFEDDLPPL DGTALLNELQ AVRVELLALV ADGERGDALR HGLRVALVGR PNVGKSSLLN
RLSRRERAIV TELPGTTRDL LESEIVLDGV PITLMDTAGI RATNDAVEQL GIARSEEALI
SADVVVLIVD GHAGWTETDA QLLARIPNDV PRVVVANKSD LDGPPLPGLV DVQFSALNGA
GEDAFVQVLL ERCGAGDAAG IVLSLNTRQR DLASVAAAAL ERSHEVAQQQ LPWDFWTIDL
REAIRGLGEI TGEELTEAVL ERVFSRFCIG K
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