Gene Syncc9902_2124 details

Gene Information

• Locus tag: Syncc9902_2124
• Symbol: prfB
• ID: 3742773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 2024042
• End bp: 2025112
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637772322
• Product: peptide chain release factor 2
• Protein accession: YP_378125
• Protein GI: 78185691
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.66989
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAGGA CTGTCTTTGA CGTACCTGCA CTGAACGCTA GGCAGCAGGA TCTCGAACAG 
CTCGCTGCAC AACCAGACTT CTGGAACGAC CAGCAAAACG CCCAAAAACA AATGCGTCGC 
CTCGATGAGG TGAAGGCCCA ACTACAGCAA TTAGCCGACT GGCGCAGCGC CATTGATGAC 
GCCAAGGCGA CACTCGAGCT GTATGAGCTT GAGGCGGATG AAGAGATGCT GGGGGAAGCA 
CAGCAGGGCC TCACGGAACT GCGTCAGGGG CTCGATCGCT GGGAACTCGA ACGGTTGCTC 
AGCGGTGAGT ACGACAAAGA AGGCGCTGTC CTCAGCATCA ATGCCGGTGC CGGCGGCACC 
GATGCTCAAG ATTGGGCCCA AATGCTGCTG CGCATGTACA CCCGTTGGGC CGAAGACCAC 
GACATGAGGG TGACCATCGA CGAAATCAGC GAGGGAGAAG AAGCAGGAAT TAAAAGCGCC 
ACCATCGAAG TGGAGGGCCG CTACGCCTAT GGCTACCTCC GCAACGAAAA AGGCACCCAT 
CGATTGGTCC GGATTTCGCC GTTTAACGCC AACGACAAAC GCCAAACCAG CTTCGCCGGC 
ATTGAAGTGA TGCCAAAACT TGAGGAAGAC GTCGATATCG ACATTCCTGA CAAGGATTTA 
GAGGTGACCA CATCGCGCTC CGGTGGTGCC GGTGGTCAGA ACGTGAACAA GGTGGAAACA 
GCCGTTCGTA TCCAACATTT ACCGACTGGC CTGGCCGTGC GGTGCACGCA AGAGCGATCA 
CAACTGCAGA ACAAAGAAAA AGCCATGGCT CTGCTGAAGG CCAAATTGTT GGTGATCGCC 
CAAGAGCAAC GGGCCGCTGA AATCGCCGAC ATTCGTGGCG ACATCGTGGA AGCCGCCTGG 
GGGAACCAGA TCCGTAATTA CGTGTTCCAT CCTTATCAAA TGGTGAAAGA CCTGCGCACT 
CAGGAGGAAA CCAACGATGT GCAAGCGGTG ATGGATGGCG CACTTGACCC GTTCATCGAC 
GCCTCTCTGC GGCAGGGTGT CGACCGACCC GGCGACGATG CCGACAACTG A 

 

Protein sequence

MPRTVFDVPA LNARQQDLEQ LAAQPDFWND QQNAQKQMRR LDEVKAQLQQ LADWRSAIDD 
AKATLELYEL EADEEMLGEA QQGLTELRQG LDRWELERLL SGEYDKEGAV LSINAGAGGT 
DAQDWAQMLL RMYTRWAEDH DMRVTIDEIS EGEEAGIKSA TIEVEGRYAY GYLRNEKGTH 
RLVRISPFNA NDKRQTSFAG IEVMPKLEED VDIDIPDKDL EVTTSRSGGA GGQNVNKVET 
AVRIQHLPTG LAVRCTQERS QLQNKEKAMA LLKAKLLVIA QEQRAAEIAD IRGDIVEAAW 
GNQIRNYVFH PYQMVKDLRT QEETNDVQAV MDGALDPFID ASLRQGVDRP GDDADN