Gene Syncc9902_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2117 
Symbol 
ID3742766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2018125 
End bp2019291 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content60% 
IMG OID637772315 
ProductO-succinylbenzoic acid--CoA ligase 
Protein accessionYP_378118 
Protein GI78185684 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.605714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGATC CCGACCACAT CTTGCAGGCC TTGGATGCCG GTCGATGGGT GCCATTGGCC 
GATGCACCAG TGCCGCTGCC CCAGGATTTA TTCCCGCCAG GTCCTGGAGT CGCGGTGAGG
AGTGGAGGCA GCAGCGGTGG TCGTCGATGG TGTTTGCAGC CTCGCCATCA TCTCGATGCT
TCCGCTGCTG CTACGGCCAC TTGGCTGCAG GGCATCGAGA TGGATCCCAA GCGGTCCCTG
GTGCTCAATC CTTTGCCGAT TCATCACGTC AGTGGGCTGA TGCCTTGGTG GCGCGCCCGC
AGCTGGGGGG TGCCTCATCA CCGCTTGCCT TCCAAGTTGA TGAAGCAGCC TGGAGAACTG
CTCCGACATT GCAGGGATTT GCCGGAGTGG TCGAATCGTT CTGTCTTGCT CTCGTTGGTG
CCAACGCAGT TGGGTCGGTT GCTATCTGAT CCAGCTGGCC GGGAATTCTT GGGCGAGATG
CGGGTGATTT GGGTTGGCGG GGCGTCGTTG GCGAAGCCCC TGGCGACGCA AGCACGGGCT
GTTGGAATCC CCTTGGCACC CTGCTACGGG GCGACTGAAA CGGCGGCGAT GGTGACGGCG
CTTTCCCCTC AACAATTTTT GGCTGGGGAT TCATCCTGCG GAGCCCCCTT GTGCGATGTG
GAATTGCGGC TTGGAGTCGA TGGAGCTTTA GAGGTCCGAA CCCAGCGCCT GGCACTGGGT
TCATGGCGTG ATGAACAGCC CGACGTGTTG TTGCCTGTTG CGAATTCCAT GGGTTGGTGG
CGTTCAGGAG ACCGGGCTCA GATCAATGGA GGATTAGTGA TCGGTGGAAG GCTTGATACG
GCCTTGAATT GTGGTGGTGA AACCGTTTTT CCCGAGCAGC TTGAAGATCG ATTGATGCGT
GAGATTCGCG TGGCTGGTTT ACCGGTTGAG TCCGTTTTGT TTTTGGGAAT GGACGACCCG
GAATGGGGAC AGCGGTTGGT GACCTTGGCG CGCGCATCCA ATCCCGTCGT GCTGGAGCAG
TTGGCAGCCA TGACGGCTGA TTGGCCAGCG TCAGACCGCC CTCGACGCTG GGTGTTGTGT
CCTGAGTTGG CTCCGACGGA TGCTGGGAAA TGGCAACGGC AAGCCTGGCG CGACTGGTTA
AAGCGGTTGG ATTTGGCCCA GGGTTGA
 
Protein sequence
MIDPDHILQA LDAGRWVPLA DAPVPLPQDL FPPGPGVAVR SGGSSGGRRW CLQPRHHLDA 
SAAATATWLQ GIEMDPKRSL VLNPLPIHHV SGLMPWWRAR SWGVPHHRLP SKLMKQPGEL
LRHCRDLPEW SNRSVLLSLV PTQLGRLLSD PAGREFLGEM RVIWVGGASL AKPLATQARA
VGIPLAPCYG ATETAAMVTA LSPQQFLAGD SSCGAPLCDV ELRLGVDGAL EVRTQRLALG
SWRDEQPDVL LPVANSMGWW RSGDRAQING GLVIGGRLDT ALNCGGETVF PEQLEDRLMR
EIRVAGLPVE SVLFLGMDDP EWGQRLVTLA RASNPVVLEQ LAAMTADWPA SDRPRRWVLC
PELAPTDAGK WQRQAWRDWL KRLDLAQG