| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2098 |
|---|
| Symbol | |
|---|
| ID | 3742100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 2002885 |
|---|
| End bp | 2004141 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637772295 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_378099 |
|---|
| Protein GI | 78185665 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCA CTCTGCCGAA AGCCTCCCAA CCGGATCCCT CCAGCCTTCA ACCGTCGGCC
CGTCCAGGTG CCCATGGACG TTTCGGACGC TTCGGTGGCC AGTACGTTCC AGAAACTCTC
ATGCCAGCGT TGGCGGAGTT GGAGCAATCG GCAGCTCAAG CCTGGGCAGA TCCAGCGTTT
ACGGGGCGAC TCAACCATCT CCTCAAGACC TACGTCGGTC GGGCCACTCC CCTCTATGAA
GCCGAGCGAC TCACGGCTCA TTACCGCCGA GACGATGGTG GCCCGCGCAT TTGGCTGAAG
CGTGAGGATC TAAACCACAC CGGCGCTCAC AAAATCAACA ATGCTCTCGG CCAGGCGCTT
TTGGCCCTGC GGATGGGCAA AAAACGAATC ATTGCTGAAA CCGGGGCTGG TCAGCATGGT
GTTGCCACAG CAACCGTCTG TGCCCGATTT GGCCTCGATT GTGTGATTTA TATGGGCGCG
GAGGACATGC GCCGACAAGC CCTCAATGTG TTCCGTATGC GTCTTCTTGG CGCCACGGTG
GCACCGGTCA CAGCTGGCTC AGCCACGTTG AAGGACGCCA CCAGCGAGGC GATTCGCGAC
TGGGTGACGA ATGTGGAAAC CACTCACTAC ATCCTCGGTT CTGTTGCTGG TCCGCACCCC
TACCCGATGT TGGTGCGCGA TTTTCACGCG GTGATCGGTC AGGAAGCGAA ACAGCAGTGT
GAGGAAGCCT TTGGCCGCCT GCCAGATGTG TTGATGGCCT GTGTGGGAGG GGGCTCGAAC
GCGATGGGGC TGTTCCATCC CTTTGTGCAA GACACCTCGG TTCGTCTGAT TGGTGTAGAG
GCCGCTGGTG ACGGTGTGAA TACCCCTCGC CATGCCGCCA CCATCACCGA AGGCCGCGCC
GGTGTGTTGC ATGGTGCAAT GAGCTTGCTG TTGCAAGACA GTGATGGTCA GGTGCAAGAA
GCCCATTCCA TAAGTGCTGG TTTGGACTAT CCCGGTGTTG GCCCTGAGCA CAGCTATCTC
AAGGAGATTG GCCGGGCTGA ATACGCAGCA GTCACCGACG AACAGGCCCT GGATGGATTG
CGCTTGGTGA GTGAGTTGGA GGGGATTATT CCGGCCCTTG AAACAGCCCA TGCCTTTGCT
TGGTTGGAGC AGCTTTGCCC CACCCTTCCC CAGGGCTGTG AAGTGGTGAT CAACTGCTCG
GGACGTGGCG ACAAAGATGT CAACACAGTC GCTGAGAAGC TTGGCGACAA GCTCTGA
|
|---|
| Protein sequence | MTSTLPKASQ PDPSSLQPSA RPGAHGRFGR FGGQYVPETL MPALAELEQS AAQAWADPAF
TGRLNHLLKT YVGRATPLYE AERLTAHYRR DDGGPRIWLK REDLNHTGAH KINNALGQAL
LALRMGKKRI IAETGAGQHG VATATVCARF GLDCVIYMGA EDMRRQALNV FRMRLLGATV
APVTAGSATL KDATSEAIRD WVTNVETTHY ILGSVAGPHP YPMLVRDFHA VIGQEAKQQC
EEAFGRLPDV LMACVGGGSN AMGLFHPFVQ DTSVRLIGVE AAGDGVNTPR HAATITEGRA
GVLHGAMSLL LQDSDGQVQE AHSISAGLDY PGVGPEHSYL KEIGRAEYAA VTDEQALDGL
RLVSELEGII PALETAHAFA WLEQLCPTLP QGCEVVINCS GRGDKDVNTV AEKLGDKL
|
|---|
| |