Gene Syncc9902_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2085 
Symbol 
ID3742587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1989474 
End bp1992353 
Gene Length2880 bp 
Protein Length959 aa 
Translation table11 
GC content53% 
IMG OID637772282 
Producthypothetical protein 
Protein accessionYP_378086 
Protein GI78185652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.85609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGAACC CCGCGACAGC AGAAGACAAT GGTGTGAGAA CGCCTGCCAC CGAGGCGGGC 
TCCTCTGCTG ATGGTGGGGC TTCTGCCAAC GTTGAAGCCT CCACTAAAAC GGTCCTTGTT
CCTGAGCAGC TCGAGCTCAA GGCCGACCGT CAGTTTTATG ACAGCAAGCG CAAGATCACT
ATTGCTGAGG GCAATGTGAC AGCTCGGCTG GGTGAGGCCC AACTCCAAGC CGATCGAATC
GAATTCGACA CTGCCTTTCG CACTCTTTTT GCACGCGGTT CCGTTCGACT GCGCCGCGGA
AACCAGTTTT TTCAAGCCTC TGTCCTGCGT TACAACCTCG TTCAAAATGA GGGTGAGCTC
GATGATGTCT ATGGCGTAAT CGACCTCGAG GACACCCCCG CAGCACTGCC AAAACCAGCA
AACAAGCCAA CGGTCGGTCG ATCCTCAACG GAATACAACA GCCAATCAGC AGAAGAAAAA
CCCCAAAGCA ACTCTGAAAC GGACAGCAGC ATGGCCTGCA CTCCGTTCTT ACCTCCGGTA
CCCGATTGGC ATCCGCAACC CTGGGCCGTC ACTGCCTGGG GTGGCCAGAT GATCGATGCT
GCTTTTGGCG ACACATTTCT GTTCAACGGC AGGATGCGCC CGGAAGCCGT GATGGGCGTT
GGGTTGCAAA AACGGATTGC GCGAGCTGGC CCCATTGCCT TGGAACTTGA AGCTGATTTG
TTCAGTCATG TGGCCAAACA ACAGCAAGGC GGCGAATACA ACCAAGACAC TCCCTACGCC
GACTTACCCG CCCAAAGCTT TGGAGAAGGC GTGCTTGGCA TCGGTGCCCG TCTTTGGGTT
CAGCCGTGGC TGAGCTTCAG CCTGATGGAA GGCGTCAGCT ACAACACCGA TCAAAGCCTT
TACGAAAAAA CCTTCCGCAA GAACTACTCA CAGCTTCTGA ATTACCTGGG TTTTGAACTC
GAAGCGGCCG TGTCTAAAGA CCTTTCACTG GTCGGACGGA TTCATCACCG ATCAGGTGCT
TTTGGCACCT ACAACGGCGT CACGGAAGGA AGCAATGCCT ATCTACTTGG CTTGCGCTAC
CGCTGGGGCC GCGATCTTCC CAACTTCGAC GTGGCTGTCA TGCCACCCCC AGACGGTTGT
CCAGATCCCG ATCGGGATCA GCGCATCAAT CCCAGTTCGT TGTCGGAGCG CCTGGAGTCG
ATTGCTCTTG GAGACGGCGG AGAACCGCAA CAACATGTGC CACTGGCAAA AAGCACAAAG
CCAGCCGAGA TAGCTCCGGC CGAACAGCAG GCCATGCGAA CAGCAGCAAT TCAAACCATT
GATCAGCGTG TCTCCGACAT TGACCTGACC GGTAGTTTTT CAATCGAACG CCGCAGCGGC
GTGCCAATCC GTCGCCTGAA CTCATCCGTT CAAGATGAAA ATCGCTTCGG CGTGGTGAAA
GTGCCGCAGC TGAAACGTTT AGGCAGCACC AAGCTGCTGA ATGGAACCAT CAGTCGCTGG
CGAATCCAGG CCAATCGCAT CCGCATTACC GCCAAAGGCT GGCAATCGGA TCGAATGGGA
TTTAGCAACG ACCCCTTCAC ACCATCACAG TCTCGGATCG ATGCTGAGGG TGTGATTGCC
AGGGAACAAC CAAATGGCGA CCTACTGATC TCAGCGCGTC GAAATCGGTT GATCATTGAT
GAACGGCTGC CCATTCCAGT CACCCGGCGC CAACTGATCG CAAAAGAAGA AGAGATCGAG
AACCGCTGGG TTCTCGGCAT TGATAACGAG GATCGCGGTG GCCTCTTCGT TGGACGAACC
ATTCCACCAA TCACGATTGG CAACAGCACG GAGTTGGCAC TCGAACCCCA GGTGCTTCTT
CAACGTGCCT TCAGTGATGG CGGCGAAAAT TTGGGGGACA TTTTTGGACT TGAAGCCAAA
TTGACGAGTC GAGTGGGTGG CTATCGCCTC AACTCAGAAG CCGATATCAG CTCATTTGAT
GGCGACTCAT TCTTAGATAA CAGCCGTTAC TGGGTGGACT TAGGTCGCAA CGTTGATCTG
GGTTTTCTTG GAGAGGTCCA AACAAAATTG TTCGGTGCCT ACCGCTATCG CACTTGGAAC
GGTTCCCTTG GTGAAACCGA CATCCAAGCC GCCTACGGCA TGTATGGAGA AAAGAGTGGT
GAATGGTCGC AAGGTGATAT CAAGCATCGC TATTTGGTTC GAGGAGCAGT TGGTGATTAC
TACGCAGATC GATTCAAGAA AAAACGGATG CTGCGCACTG GTCGTGGAAG TTTGTTCGCA
TCACTCACCA GCAATTTCCC CCTTTGGAAA GGGAACAGAG CCGAACTAAC ACCCACACAG
GCCTATCGCT ATTCACCCGT TGCCATCGTT CCTGGGGTCA GCCTGGCCAC CAACATCAAC
AGCACAGTGG CGATGTACGG CCAAGGGTCT CAGCAATCAA GCCTCAGCTT TAGTGGAGGT
CCTACAGTCA CTTTGGGCAC ATTCAGCAAG CCATTCCTGG ATTTCACCCA GATCTCTGTG
ATCGGTGGGG GCACTCTTCA AAGCGGAGAA AGCCCGTTCG AGTTCGACAG AATTGTTGAC
TTTGGAACCC TTGGAGTAGG TATTACGCAG CAAATCGTTG GGCCTTTGAT GTTCAGCACA
GGAGTGAATC TGAATGTTGA TCCTGGCTCG GCCTATTACG GAGAGGTGAT CGACTCCAAT
TTTGAGCTGC GCTGGCAGCG CCGCAGCTAC GACATTGGCT TGTATTTCAA TCCCTACGAA
GGAATTGGAG GCGTACGATT CCGATTAAAT GATTTCAAAT TCAAAGGAAC AGGTGTTCCC
TTCGTGCCAT ACGCCCCAAC AGACTGGCTC AATCACAACA GCAAAAATCA ACCCTTTTAA
 
Protein sequence
MSNPATAEDN GVRTPATEAG SSADGGASAN VEASTKTVLV PEQLELKADR QFYDSKRKIT 
IAEGNVTARL GEAQLQADRI EFDTAFRTLF ARGSVRLRRG NQFFQASVLR YNLVQNEGEL
DDVYGVIDLE DTPAALPKPA NKPTVGRSST EYNSQSAEEK PQSNSETDSS MACTPFLPPV
PDWHPQPWAV TAWGGQMIDA AFGDTFLFNG RMRPEAVMGV GLQKRIARAG PIALELEADL
FSHVAKQQQG GEYNQDTPYA DLPAQSFGEG VLGIGARLWV QPWLSFSLME GVSYNTDQSL
YEKTFRKNYS QLLNYLGFEL EAAVSKDLSL VGRIHHRSGA FGTYNGVTEG SNAYLLGLRY
RWGRDLPNFD VAVMPPPDGC PDPDRDQRIN PSSLSERLES IALGDGGEPQ QHVPLAKSTK
PAEIAPAEQQ AMRTAAIQTI DQRVSDIDLT GSFSIERRSG VPIRRLNSSV QDENRFGVVK
VPQLKRLGST KLLNGTISRW RIQANRIRIT AKGWQSDRMG FSNDPFTPSQ SRIDAEGVIA
REQPNGDLLI SARRNRLIID ERLPIPVTRR QLIAKEEEIE NRWVLGIDNE DRGGLFVGRT
IPPITIGNST ELALEPQVLL QRAFSDGGEN LGDIFGLEAK LTSRVGGYRL NSEADISSFD
GDSFLDNSRY WVDLGRNVDL GFLGEVQTKL FGAYRYRTWN GSLGETDIQA AYGMYGEKSG
EWSQGDIKHR YLVRGAVGDY YADRFKKKRM LRTGRGSLFA SLTSNFPLWK GNRAELTPTQ
AYRYSPVAIV PGVSLATNIN STVAMYGQGS QQSSLSFSGG PTVTLGTFSK PFLDFTQISV
IGGGTLQSGE SPFEFDRIVD FGTLGVGITQ QIVGPLMFST GVNLNVDPGS AYYGEVIDSN
FELRWQRRSY DIGLYFNPYE GIGGVRFRLN DFKFKGTGVP FVPYAPTDWL NHNSKNQPF