Gene Syncc9902_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2079 
Symbol 
ID3742581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1984898 
End bp1985518 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content56% 
IMG OID637772276 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_378080 
Protein GI78185646 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGCCCC ATCAGCTCAG CCTTGTGGTT GGTTTGGGAA ACCCTGGGTC GAAGTACGAC 
GGCACCCGAC ACAACATTGG TTTCATGGCC CTCGAGCGTT TGGCGCGCAG AGAAGGCTTC 
AGTTTTCGGC AACAGGCCAA GTTGCATGGA CTATCGGCTG ATAAAGGCTT TGGGGATCAG 
CGCTTGCGCT TGCTCATGCC TCAAACGTTC ATGAACGACA GTGGACGTTC CGTGCGCGCA 
GCTCTCGATT GGTATGGCTT TCAGCCAGAA GAAATCGTGT TGCTTGTCGA CGATATGGAC 
CTCCCTCTTG GACGGTTACG GCTGCGTGCG CAGGGAAGTG CCGGGGGACA CAACGGTCTC 
CGCAGCACGA TCCAGCATCT TGGAACGCAA GTCTTCCCTC GATTACGAAT TGGAATCGGT 
GCCCCCGCAG AGAATCCAGC GGAACGACGA GCTCGCACGG TGTCCCATGT GCTTGGTCCC 
TTCAGTCGAG CTGAACAGCC CTGTGTTGAT GCAGTGTTGG ATGCAGTTTT GGATGGTTTA 
GATCGCCTGA AAACGCAGGG CATGGAACGG GCTGGCACCT GGATCAATGG GTTCCGGTAT 
GAATCCCCTT CTGCAACTTG A
 
Protein sequence
MMPHQLSLVV GLGNPGSKYD GTRHNIGFMA LERLARREGF SFRQQAKLHG LSADKGFGDQ 
RLRLLMPQTF MNDSGRSVRA ALDWYGFQPE EIVLLVDDMD LPLGRLRLRA QGSAGGHNGL 
RSTIQHLGTQ VFPRLRIGIG APAENPAERR ARTVSHVLGP FSRAEQPCVD AVLDAVLDGL 
DRLKTQGMER AGTWINGFRY ESPSAT