Gene Syncc9902_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2060 
SymbolileS 
ID3743428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1966411 
End bp1969332 
Gene Length2922 bp 
Protein Length973 aa 
Translation table11 
GC content56% 
IMG OID637772257 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_378061 
Protein GI78185627 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAAG AAACACGCGG TGCCGCTGAG GAACGTCCCT CTTACAAAAA CACCCTCAAC 
TTGCTGCAAA CCAGTTTTGG GATGCGTGCC AATGCCGTCA CCCGGGAGCC TGAACTTCAG
AGCTTTTGGG CGGAACACGG GATTGATTTC AAGCTTGGCG TAACCAACAA AGGGCCGACC
TTCACCCTCC ACGACGGGCC TCCCTATGCC AATGGCGCCT TACACATGGG CCACGCTCTT
AACAAGGTGC TCAAAGACAT CGTCAACAAG CACCAAATTT TGAAGGGGCG CCGGGTTCGG
TTTGTCCCAG GTTGGGACTG CCATGGCCTA CCCATCGAAC TGAAAGTGCT GCAGTCGATG
GATCAGGAGC AACGACAGGC GCTGACTCCA ATCAAGCTGC GCAAAAAGGC TGCTGCTTAC
GCCCGAAAGC AAGTGGAGGG GCAAATGAAA GGCTTCCAGC GCTGGGGGAT CTGGGCCGAC
TGGGATCAGC CGTACCTCAG CCTGCAAAAG GACTACGAAG CCGCTCAGAT CCGGGTCTTC
GGCGACATGG TTTTGAAGGG ACATATTTAT CGCGGCTTGA AACCTGTGCA TTGGAGCCCC
AGCTCCCGCA CAGCCCTCGC CGAAGCGGAA CTGGAATATC CCGATGGCCA CACCAGTCCA
AGCGTTTACG CCACATTCCC CGCCGTCGAA CTTCCAGCGG TCCTGCGCGA CGCTTTGCAA
ACAGACGGCA TCGTTCTCCC CAGCCAAGCC GAGGAACTTG GCAAAACCCT TCACGTTGCG
ATCTGGACCA CAACCCCTTG GACCCTCCCC GCCAATCTGG CGGTGTCCGT CAACGAGCGA
CTCGACTACG CCCTCGCCGA TGACGGCAGC GGTCGTCTGC TCCTCGTCGC AGCAGAACTG
ATTGAGTCCC TGAGTGGAAC CCTCGCCCTC CCTTTAAAGC GAAAAGCCAC GGTCAAAGGT
GCGTTGTTGG CTGGCCTGAT CTATCGCCAT CCCCTCCTGG ACCGGACAAG CCCCATCGTG
ATTGGCGGCG AATACATCAC CACCGAATCA GGGACTGGCC TCGTGCACAC CGCACCGGGC
CATGGCGTGG ATGACTTCCA TACCGGCCAG AAAAATGGCT TGCCGGTGCT TTGTCCTGTC
GACGAGGCGG GCACCCTCAC CGAGGAAGCC GGGCCGTTTG CCGGCCTCAA CGTGCTGAAG
GATGCCAACC CAGCCATCAT CGAGGCCCTT CAGCAGGCTG ACGCTCTGCT GAAACATGAG
CCCTACGGCC ATCGCTACCC CTACGACTGG CGCACCAAAA AACCAACGAT CTTCCGCGCT
ACCGAGCAGT GGTTCGCCTC CATTGATGGA TTCCGTGACG ATGCACTCGA CGCCATCGAC
AAGGTGAATT GGACGCCTGC ATCAGGTCGA AACCGGATCG AATCGATGGT GAAAGAGCGC
GGAGACTGGT GCATCTCCCG CCAGCGCACC TGGGGCGTTC CGATTCCGGT TTTCTACAAC
CGCACCAATG GGGAGGTATT GCTCAACGCC GACACCTTGG CTCATATCCA GGGCCTCATT
GCTGACCATG GCGCAGATGT TTGGTGGGAA AAAGATGAAT CGGAGCTCCT ACCAGCGGCC
TACGCAAGCG AAGCCGACCA ATGGCGGAAA GGCACGGACA CGATGGATGT GTGGTTCGAC
TCAGGCTCCA GTTGGGCCGC TGTTGCAAGC CAACGCGACA ACCTCAGTTA CCCAGCAGAT
CTTTACTTAG AGGGTTCCGA CCAGCACCGT GGCTGGTTCC AGAGCTCTCT TCTCACCTCT
GTGGCCGTTA ATGGCCATGC TCCCTATCAA CGCGTTCTCA CCCATGGCTT CGCCCTGGAT
GAGAAAGGTC GCAAAATGAG CAAATCATTG GGCAATGTGG TGGACCCAAT GGTGATCATT
GCTGGGGGTA AAAATCAAAA ACAAGACCCT CCCTACGGCG CAGATGTTTT GCGTCTTTGG
GTGAGTTCAG TGGATTATTC AGCCGACGTT CCGATCGGAG CAGGAATCCT GCGACAGCTG
GCTGACGTGT ACCGAAAAGT CCGCAATACC AGCCGCTATC TACTCGGCAA TCTGCATGAT
TTCAATCCAA GCCGTGACGG GATTCCAGTC CATGAGCTAC CCCTACTCGA TCGATGGATG
CTTCAACGCT CAGCGGAAGT TATGGACGAC ATCAATGCAG CATTTGAGAA TTTTGAATTT
TATCGCTTCT TTCAACTGCT CCAGAACTAT TGCGTTTCCG ACTTATCAAA CTTTTATCTA
GATATCGCCA AGGATCGTCT TTATGTAAGC GCGCCTGATG ATCGGCGCCG GCGAAGCTGT
CAAACAGTCA TGGCCTTAAT TATTGAACGC CTGGCTGGCC TAATCGCTCC CGTCCTCTGC
CACATGGCAG AAGACATTTG GCAAAACCTT CCCTATCCAG TAGCCCATAC GTCGGTGTTC
CAAAACGGCT GGCCCAGTGT TCCTGCCGAT TGGCGAGACC CCGCACTGAC AGCTCCAGTG
CAGCAACTTC GCCAGCTCCG AACAGCGGTA AACAAGGTGC TGGAGGACTG CCGAAACCAA
CAAGAACTCG GCGCTTCTCT GGAAGCAGCC GTTCGTTTAG AAGCCCACAG CCCTGAACTC
CAAACCGCTC TGCAATGGCT CGATGAGCAC GGCGACGCTG AAGTTGATGG CCTACGCGAT
TGGCTGCTGG TCTCTCAACT CCAAATTGGC GGTGAGCCAT GGGCAGAACT CTTGGCCAGT
CAAGACAATG AACAAGCTTT GATTGAAGTG GCCCATGCCC GCGGCAGCAA GTGCAGTCGC
TGCTGGCACT ACGAAGCCGA CGTTGGTCAG CACACCGACC ATCCCGACCT ATGCGGACGT
TGCATTGAAG TGCTGAAGAG AGGCGATTAC CAACTGGCTT GA
 
Protein sequence
MNKETRGAAE ERPSYKNTLN LLQTSFGMRA NAVTREPELQ SFWAEHGIDF KLGVTNKGPT 
FTLHDGPPYA NGALHMGHAL NKVLKDIVNK HQILKGRRVR FVPGWDCHGL PIELKVLQSM
DQEQRQALTP IKLRKKAAAY ARKQVEGQMK GFQRWGIWAD WDQPYLSLQK DYEAAQIRVF
GDMVLKGHIY RGLKPVHWSP SSRTALAEAE LEYPDGHTSP SVYATFPAVE LPAVLRDALQ
TDGIVLPSQA EELGKTLHVA IWTTTPWTLP ANLAVSVNER LDYALADDGS GRLLLVAAEL
IESLSGTLAL PLKRKATVKG ALLAGLIYRH PLLDRTSPIV IGGEYITTES GTGLVHTAPG
HGVDDFHTGQ KNGLPVLCPV DEAGTLTEEA GPFAGLNVLK DANPAIIEAL QQADALLKHE
PYGHRYPYDW RTKKPTIFRA TEQWFASIDG FRDDALDAID KVNWTPASGR NRIESMVKER
GDWCISRQRT WGVPIPVFYN RTNGEVLLNA DTLAHIQGLI ADHGADVWWE KDESELLPAA
YASEADQWRK GTDTMDVWFD SGSSWAAVAS QRDNLSYPAD LYLEGSDQHR GWFQSSLLTS
VAVNGHAPYQ RVLTHGFALD EKGRKMSKSL GNVVDPMVII AGGKNQKQDP PYGADVLRLW
VSSVDYSADV PIGAGILRQL ADVYRKVRNT SRYLLGNLHD FNPSRDGIPV HELPLLDRWM
LQRSAEVMDD INAAFENFEF YRFFQLLQNY CVSDLSNFYL DIAKDRLYVS APDDRRRRSC
QTVMALIIER LAGLIAPVLC HMAEDIWQNL PYPVAHTSVF QNGWPSVPAD WRDPALTAPV
QQLRQLRTAV NKVLEDCRNQ QELGASLEAA VRLEAHSPEL QTALQWLDEH GDAEVDGLRD
WLLVSQLQIG GEPWAELLAS QDNEQALIEV AHARGSKCSR CWHYEADVGQ HTDHPDLCGR
CIEVLKRGDY QLA