Gene Syncc9902_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2028 
SymbolrnhB 
ID3742068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1933830 
End bp1934429 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content57% 
IMG OID637772225 
Productribonuclease HII 
Protein accessionYP_378029 
Protein GI78185595 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGGC TGGAGGAAAT CCCCAGTGGT TCTCGGGTTG CGGGTGTCGA TGAAGTCGGC 
CGTGGTTGTT TGTTCGGTCC GGTGTTTGCT GCCGCCGTGG TTTTGGATGA GGTCGCAGAG 
CAACGGCTAT GGCAAGCGGG GCTAACCGAC AGTAAAAAAT TGTCTGCGAA GCGGCGCGCA 
GGATTGGTGC CGTTGATTGA GCAACATTGT TTAACCAGGG GACTGGGTCA AGCATCGGCC 
CATGAAATTG ATGCTGTGGG GATTCGAGGG GCGACAGAAC GGGCGATGCT TCGCGCTCTA 
CAGAAATTGG CGCATCCCCC AAATGTTGTT CTTGTTGATG GAAATCTTCC CCTTCGACTT 
TGGAGTGGGT CACAGCAAAC TGTTGTGGGA GGCGACTCGC GCTCGGCCGC GATCGCTGCT 
GCCAGCGTGT TGGCGAAGGA AGCGCGTGAT GCATTGATTC GGCGGTTGTC GGATCAATTT 
CCGGGCTATG GCCTTGAACG CCATGCTGGC TATGGCACGG CTCTGCATCA GAAAGCCTTG 
CTGGCCTTGG GTCCTACGTC CCTACATCGC CGAAGCTTTC TTCGACGGTT ATTGGGTTAG
 
Protein sequence
MTRLEEIPSG SRVAGVDEVG RGCLFGPVFA AAVVLDEVAE QRLWQAGLTD SKKLSAKRRA 
GLVPLIEQHC LTRGLGQASA HEIDAVGIRG ATERAMLRAL QKLAHPPNVV LVDGNLPLRL 
WSGSQQTVVG GDSRSAAIAA ASVLAKEARD ALIRRLSDQF PGYGLERHAG YGTALHQKAL 
LALGPTSLHR RSFLRRLLG