Gene Syncc9902_2022 details

Gene Information

• Locus tag: Syncc9902_2022
• Symbol: tuf
• ID: 3742062
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1929159
• End bp: 1930358
• Gene Length: 1200 bp
• Protein Length: 399 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637772219
• Product: elongation factor Tu
• Protein accession: YP_378023
• Protein GI: 78185589
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0050] GTPases - translation elongation factors
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.466852
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGCG AGAAGTTCGA AAGGAACAAG CCCCACGTCA ACATCGGCAC CATCGGCCAC 
GTTGACCACG GCAAAACCAC GCTGACTGCA GCTATCACCA ATGTGCTCGC CAAGAAAGGG 
CAAGCGCAGG TTCAAAACTA TGCCGATATT GACGGTGCTC CAGAGGAGCG CGAGCGCGGT 
ATCACCATCA ACACTGCCCA CGTTGAGTAC GAAACCGAAA AGCGTCACTA CGCCCACGTT 
GACTGCCCTG GACACGCTGA TTATGTGAAA AACATGATCA CGGGTGCTGC CCAAATGGAT 
GGCGCAATCC TGGTTTGTGC CGCCACAGAT GGCCCGATGG CGCAAACCAA GGAGCACATC 
CTCCTAGCTA AGCAAGTTGG CGTGCCCGCA CTGGTTGTTG CTTTAAACAA GTGCGACATG 
GTCGATGACG AAGAGATCAT CGAGTTGGTG GAAATGGAAA TTCGTGAGCT GCTGTCCAGC 
TACGACTTCC CCGGCGACGA CATTCCCGTT ATCCAGGTCT CTGGCTTGAA AGCCATTGAG 
GGAGAAGCTG AGTGGGAAGC CAAGATCGAT GAGTTAATGG ACGCTGTGGA TGCAAGCATC 
CCCGAGCCCG AGCGCGAAGT CGATAAGCCG TTCTTGATGG CTATTGAAGA TGTGTTCTCC 
ATCACGGGCC GAGGCACGGT TGCTACCGGT CGTATCGAGC GTGGCATCGT CAAAGTTGGC 
GAAGAAGTTG AAGTAGTCGG CATCCGCGAC CCCCGTAAAA CCACCGTTAC TGGTGTGGAA 
ATGTTCCGCA AATTGCTCGA TGAGGGCATG GCGGGTGACA ACGTTGGTCT CCTGCTTCGC 
GGTATTCAGA AGGAAGACAT CGAGCGCGGC ATGGTGTTGG TGAAGCCTGG CTCCATCACA 
CCTCACACCA AGTTCGAAGG TCAGGTGTAC GTCTTGAAGA AAGAAGAAGG CGGTCGCCAC 
ACTCCTTTCT TTGCTGGCTA TCGCCCGCAG TTCTACATCC GTACAACGGA CGTGACTGGC 
CAAATCACCG CATTCACAGC GGAAGACGGC TCCAACGTGG AAATGGTGAT GCCTGGTGAC 
AACATCCAGA TGACCGGTGA GCTGATCTGC CCAGTGGCCA TGGAAATGGG CATGCGCTTC 
GCAATCCGTG AAGGCGGCCG CACCATCGGT GCTGGTGTGG TGTCCAAGAT CATCGAATGA 

 

Protein sequence

MAREKFERNK PHVNIGTIGH VDHGKTTLTA AITNVLAKKG QAQVQNYADI DGAPEERERG 
ITINTAHVEY ETEKRHYAHV DCPGHADYVK NMITGAAQMD GAILVCAATD GPMAQTKEHI 
LLAKQVGVPA LVVALNKCDM VDDEEIIELV EMEIRELLSS YDFPGDDIPV IQVSGLKAIE 
GEAEWEAKID ELMDAVDASI PEPEREVDKP FLMAIEDVFS ITGRGTVATG RIERGIVKVG 
EEVEVVGIRD PRKTTVTGVE MFRKLLDEGM AGDNVGLLLR GIQKEDIERG MVLVKPGSIT 
PHTKFEGQVY VLKKEEGGRH TPFFAGYRPQ FYIRTTDVTG QITAFTAEDG SNVEMVMPGD 
NIQMTGELIC PVAMEMGMRF AIREGGRTIG AGVVSKIIE