Gene Syncc9902_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1996 
Symbol 
ID3743718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1900321 
End bp1901715 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content57% 
IMG OID637772192 
Producthypothetical protein 
Protein accessionYP_377997 
Protein GI78185563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.339818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGC TGCTCATCAC AGGCATGCCA GTCGCAGGTT TAGCCCTGCC CACTTGGATG 
CTTGGAAAGG ACAGTCGTCA GGAAACGCCC CTGGCAAGCC AGGTTCCATC GGGACGATTG
CAAGAAGTTG CCCCCCCTGG AGCGGTGCAA CAACTGCGCG AAAACCTGCA GCGTTATCAA
CCGAATCTGC GTCTCATTAG CCCAACTGAC GACAGCGAGA TCAACGCCGA CAGCATCGAT
CTCGTCCTGG AAGTGAAGGA CTGGCCTGTG AGCCGAGATC TAGAACTCGG TCTTGGCCCC
CATGTCGTCG TGCAAATTGA CAATCAACCG CCACGTCAAC TGGACGAACT CGATGGCAAT
CGTGTGCATG TGCAACTGGA CGACCTCTCC CCAGGCAGCC ATCGGTTCAG CGCTTGGACG
GCATATCCCT GGGGAGAAGC AGTAAAAACG CCTGGCGCCA ACCTTCAAGG ACGATTCCAT
CTCTGGCAAC GCATCGAAGG GACCCAGCCA AAAGACGACG CGCCATGGAT TGTTCCCGTG
ACAAGTTCGG CCAGTCCAGC CCTACAACCA TTGCTCTTGG ACTGGATCAT TTGGAATGCT
CCCCTCCAAA ACCTGCGTGA TGGGGACGGT CGGTGGCGAT TGCGGATCAG CGTGGATGGG
GACAGTTTTT TAGTGGATCA CCAAGAAGCG CTTTGGCTGA AGGGGAGTTC CTCCAGCCGT
GGGAATTTGG TGCAGATGGA GCTGCTCAAT GGAGTCGGAG AGCCGATCAC GCCTGAATTC
AACAATCAGC TCATCCATCA ATCAGGCCGA AGAACGGGAA CCCCACCGTG GATGAAAGCT
CAACTCACGC AGGAGGAACT CACACGGCTC AGCGGAGCGC CACGCATTCC CTCCGCAGAC
CTGGTGCCAG AGGCAAAGGC AAAACCAGAA CCAATAGAGG AGAGAGAAAC AAAACCAAAA
GCCCAGCCAG TTGTCACGGC AGAGAACCTG ACTGAATCAC CCGATGAAGG TGAGGTCACA
GCTTCGCCCA AGCCCGAGGC ATCGCCGGAG GCCGCACAAG TGGAAGATTC AGACAAGGGA
GTCAGTGATC TCATGGGATC TGAGCCCGAA CCGAAACTGA ATGCTGATGC GTTGGGCGAT
GAACAAGACA GCACAGACGA CTCGGACGAC TCCACCTTCG AAGAAGCAGC TGACGATGTC
AGCAAGGACA ACAGTGACGA CCTCGCACCC CCAGCCGAGC CAATCGCCTT GGACGACCAA
GGTCCACTCC CGAAGAGCGA AAAACCATCC ATGCCTGTTC CTTCAGCATC GGAAGAGCGC
GTCATACCAA CCAGTCGCCT GGGAGGATCA GCACGGGAGT TGCTGAATGA CGACGGCAGC
TTGCGCAAGC CCTGA
 
Protein sequence
MAMLLITGMP VAGLALPTWM LGKDSRQETP LASQVPSGRL QEVAPPGAVQ QLRENLQRYQ 
PNLRLISPTD DSEINADSID LVLEVKDWPV SRDLELGLGP HVVVQIDNQP PRQLDELDGN
RVHVQLDDLS PGSHRFSAWT AYPWGEAVKT PGANLQGRFH LWQRIEGTQP KDDAPWIVPV
TSSASPALQP LLLDWIIWNA PLQNLRDGDG RWRLRISVDG DSFLVDHQEA LWLKGSSSSR
GNLVQMELLN GVGEPITPEF NNQLIHQSGR RTGTPPWMKA QLTQEELTRL SGAPRIPSAD
LVPEAKAKPE PIEERETKPK AQPVVTAENL TESPDEGEVT ASPKPEASPE AAQVEDSDKG
VSDLMGSEPE PKLNADALGD EQDSTDDSDD STFEEAADDV SKDNSDDLAP PAEPIALDDQ
GPLPKSEKPS MPVPSASEER VIPTSRLGGS ARELLNDDGS LRKP