Gene Syncc9902_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1995 
SymbolpsaA 
ID3743717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1897572 
End bp1899875 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content55% 
IMG OID637772191 
Productphotosystem I P700 chlorophyll a apoprotein A1 
Protein accessionYP_377996 
Protein GI78185562 
COG category 
COG ID 
TIGRFAM ID[TIGR01335] photosystem I core protein PsaA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA GCCCACCTGA ACGTGGGAGT GACGCGAAGA GCCAGGTCGA AAAGGTTGAC 
AATCCTGCAA CCTTTGAATT GTTCGGCAAG CCCGGACATT TCGACCGAGC CCTCGCAAAG
GGTCCCAAAA CCACAACCTG GGTTTGGAAC CTTCACGCCA ACGCTCACGA TTTCGACGCT
CATACGAGTG ACCTTCAAGA GGTCTCTCGG CGAATCTTCT CAGCTCATTT CGGCCATTTG
GCCGTCATTT TCATCTGGCT GAGCGGCGCC TTCTTCCACG GCGCTCGCTT CTCCAACTAT
TCCGGTTGGC TAGCTGATCC CACCCACGTG AAGCCAAGTG CTCAGGTGGT GTGGCCGATC
TTTGGCCAGG AAATCCTGAA CGGTGACATG GGTGCCGGAT TTAACGGCAT TCAGATCACC
TCAGGTCTCT TCCACGTTTG GCGTGGATGG GGCATCACCA GCGAAACCCA GCTCATGGCT
TTGGCCATCG GTGCGTTGGT GATGGCCGGA CTCATGCTCA ACGCTGGAGT TTTCCATTAC
CACAAGTCAG CTCCAAAGCT GGAGTGGTTC CAGAACGTTG AGTCCATGCT CAACCACCAC
CTGGCAGGTT TGCTGGGTCT TGGCTCTCTG TCATGGGCTG GACACTTGAT TCATGTGTCC
CTCCCCGTCA CCAAGTTGAT GGATGCCATT GATGCCGGCG AACCGCTGGT TTTAAACGGC
ACCACCATCG CTTCGGCGGC AGACATCCCT CTTCCCCATG AGTTCTTTAA TCAGGACTTA
TTGGCACAGC TTTATCCAGG CATTGGGTCT GGTATTTCCG CTTTCTTCTC AGGTAACTGG
GCGGCTTACG GGGACTTCCT CACCTTTAAA GGTGGTTTGA ACCCTGTGAC CGGAAGCCTT
TGGATGACCG ACATCGCTCA CCACCACGTG GCGATCGCTG TCTTGTTCAT TGTTGCCGGT
CATATGTACC GGACCAACTG GGGCATTGGT CACTCCATCA AGGAGATCCA CGAAGGTCAG
AAGGGCGATC CCCTCCTGTT CCCCGCACCC AATGGTCACG ATGGGCTCTA TGAGTTCATG
ACCACTTCCT GGCATGCCCA ATTGGCCGTG AACCTGGCAA TGCTGGGTTC GTTGAGCATC
ATCGTTGCTC AGCACATGTA CGCGATGCCT CCTTACGCGT ATATGGCGGT TGATTACCCA
ACTCAAATCG GTTTGTTCAC CCATCACATC TGGATTGGTG GCTTCTTGAT TGTTGGTGGC
GCGGCTCACG CCGCTATCGC CATGGTTCGT GATTACGACC CTGCGAAACA CATCGACAAC
GTGCTCGATC GTGTTCTCAA GGCTCGCGAT GCGATCATCA GCCACCTCAA CTGGGTGTGC
ATCTGGCTCG GAGCCCACAG CTTCGGCCTC TATATCCACA ACGACACCAT GCGTGCCCTG
GGGCGTCCCC AGGACATGTT CAGCGATCAG GCGATTTCAA TTCAGCCGAT CTTTGCTCAG
TGGATTCAAA ACGCACACGC GGCCGCGGCG GGTAGCACTG CTCCCAACGC TTTGGCTGGC
GTGAGTGAAG TGTTCAACGG TTCTGTTGTC GCTGTCGGCG GAAAAGTCGC GGCTGCTCCA
ATGCCATTGG GCACCGCTGA TTTCATGGTG CACCACATCC ATGCCTTCAC GATTCACGTG
ACGGTGTTGA TCCTGCTGAA GGGTGTTCTG TATGCCCGTA GTTCCCGTCT GATTCCAGAT
AAGGCGAACC TCGGCTTCCG CTTCTCCTGC GACGGCCCTG GCCGTGGCGG TACATGTCAG
GTGTCGGCTT GGGACCACGT GTTCCTTGGC CTGTTCTGGA TGTACAACTC CCTGTCGATT
GTTATTTTCC ACTTCTCATG GAAGATGCAA AGCGATATTT GGGGGACGGT GAATGCGGAT
GGTTCTGTTG CGCACATCAC CAACGGAAAC TTTGCGCAGA GCGCCATCAC CATTAATGGT
TGGCTGCGTG ATTACCTCTG GGCTCAGGCC GTGCAGGTGA TCAACAGCTA TGGATCCTCC
ACCAGTGCCT ACGGAATCAT GTTCCTAGGT GCTCACTTCA TCTGGGCGTT CAGCCTGATG
TTCCTGTTCA GTGGCCGCGG CTATTGGCAG GAGTTGATTG AGTCCATTGT TTGGGCCCAC
AACAAGTTGA AGGTGGCTCC TGCCATCCAG CCCCGTGCGC TTTCAATCAT CCAAGGCCGT
GCAGTGGGTG TTGCCCACTA CCTCTTGGGT GGTATTGCGA CCACTTGGGC TTTCTTCCAC
GCCCACATTC TTGTGGTCGG CTGA
 
Protein sequence
MTISPPERGS DAKSQVEKVD NPATFELFGK PGHFDRALAK GPKTTTWVWN LHANAHDFDA 
HTSDLQEVSR RIFSAHFGHL AVIFIWLSGA FFHGARFSNY SGWLADPTHV KPSAQVVWPI
FGQEILNGDM GAGFNGIQIT SGLFHVWRGW GITSETQLMA LAIGALVMAG LMLNAGVFHY
HKSAPKLEWF QNVESMLNHH LAGLLGLGSL SWAGHLIHVS LPVTKLMDAI DAGEPLVLNG
TTIASAADIP LPHEFFNQDL LAQLYPGIGS GISAFFSGNW AAYGDFLTFK GGLNPVTGSL
WMTDIAHHHV AIAVLFIVAG HMYRTNWGIG HSIKEIHEGQ KGDPLLFPAP NGHDGLYEFM
TTSWHAQLAV NLAMLGSLSI IVAQHMYAMP PYAYMAVDYP TQIGLFTHHI WIGGFLIVGG
AAHAAIAMVR DYDPAKHIDN VLDRVLKARD AIISHLNWVC IWLGAHSFGL YIHNDTMRAL
GRPQDMFSDQ AISIQPIFAQ WIQNAHAAAA GSTAPNALAG VSEVFNGSVV AVGGKVAAAP
MPLGTADFMV HHIHAFTIHV TVLILLKGVL YARSSRLIPD KANLGFRFSC DGPGRGGTCQ
VSAWDHVFLG LFWMYNSLSI VIFHFSWKMQ SDIWGTVNAD GSVAHITNGN FAQSAITING
WLRDYLWAQA VQVINSYGSS TSAYGIMFLG AHFIWAFSLM FLFSGRGYWQ ELIESIVWAH
NKLKVAPAIQ PRALSIIQGR AVGVAHYLLG GIATTWAFFH AHILVVG