Gene Syncc9902_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1994 
SymbolpsaB 
ID3743716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1895343 
End bp1897550 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content55% 
IMG OID637772190 
Productphotosystem I P700 chlorophyll a apoprotein A2 
Protein accessionYP_377995 
Protein GI78185561 
COG category 
COG ID 
TIGRFAM ID[TIGR01336] photosystem I core protein PsaB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.28805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGA AATTTCCTTC GTTCAGCCAG GGTCTGGCCC AGGACCCGAC AACCCGCCGT 
ATTTGGTACG GGATCGCCAC GGCTCACGAC TTCGAGAGCC ATGACGGAAT GACGGAGGAG
CGGCTTTATC AAAAGCTCTT CTCCACACAT TTCGGCCATC TCGCGATCAT CGGCCTGTGG
GTTTCGGGAA ACCTGTTCCA CATCGCCTGG CAGGGCAACT TCGAGCAGTG GGTCGCCGAC
CCTCTGCACG TGCGCCCCAT CGCTCACGCA ATTTGGGATC CCCACTTTGG TCAAGGCGCC
ATTGACGCCT TTACCCAAGC TGGTGCTTCC TCCCCAGTGA ACATTGCCTA CTCAGGCCTT
TATCACTGGT TTTACACAAT CGGCATGACC ACGAATGCCG AGCTGTATCA AGGATCCATC
TTCATGATGA TCCTGTCGGC TTGGGCCCTG TTCGCTGGTT GGTTGCATCT GCAACCCAAG
TTCCGTCCTT CTCTTGCTTG GTTCAAAAAC GCTGAGTCGC GTTTGAACCA TCACCTCGCT
GTTCTCTTTG GATTCAGCTC CATCGCTTGG ACCGGTCACC TGGTTCACGT GGCGATCCCT
GAGTCCCGTG GTCAGCACGT CGGTTGGGAC AATTTCCTCA GCGTGATGCC TCATCCCGCA
GGACTTGGCC CTTTCTTCAC CGGCAACTGG GGCGTGTACG CCCAGAACCC CGATTCCATG
AATCAGGTGT TCGGGAGTAC AGAAGGATCT GGTACTGCGA TTTTGACCTT CTTGGGTGGT
TTTCACCCCC AAACAGAGGC TCTTTGGCTC ACGGACATTG CCCATCACCA TTTGGCGATC
GGTTGTTTGT TCGTGATTGC CGGTCACATG TACCGGACCA ACTTCGGTAT TGGTCACTCC
ATTAAGGAGA TCCTCGAAAC CCACAATCCT CCCAAGGGCA CTCCTGGGGA TTTGGGGGCT
GGCCATAAAG GCCTGTACGA CACCATCAAC AACAGCCTTC ACTTCCAGTT GGGCTTGGCC
CTCGCCTCAC TCGGCGTGGT GACCAGCTTG GTGGCGCAGC ACATGTATGC GATGCCGTCG
TATGCCTTCA TCGCGAAGGA CTACACAACC TCGGCAGCGC TTTACACCCA CCACCAGTAC
ATCGCCATCG CTTTGATGTG TGGTGCCTTC GCTCACGGTG CGATCTTCTT CATTCGTGAT
TACGACCCCG AAGCCAATAA GGACAACGTC CTGGCTCGGA TGCTCGAGCA CAAGGAAGCG
ATCATTAGTC ACTTGAGCTG GGTGTCTCTC TTCCTCGGGT TCCATACCTT GGGCCTCTAC
GTCCATAACG ACGTTGTTGT TGCCTTCGGT ACGCCTGAGA AGCAGATCCT GGTGGAGCCT
GTGTTTGCTC AGTTTGTTCA AGCTGCCTCG GGTAAAGCGA TCTATGGCTT TGATGTGCTG
CTCTCCAATG CTGGAGGCGC GGCTGCCAAT GCCAATGCCG CTTACATGGA CGGTTGGATG
GGCGCAATCA ACGGCAACAC CGATGTGTTC CTGCCGATTG GTCCTGGTGA CTTCCTTGTG
CACCACGCCA TCGCTCTTGG ACTCCACACC ACAACCCTCA TCCTTGTGAA GGGTGCGTTG
GATGCCCGTG GTTCCAAGCT GATGCCCGAC AAGAAGGATT TCGGCTATTC CTTCCCTTGT
GATGGCCCTG GCCGTGGCGG TACCTGCGAC ATCTCAGCTT GGGATGCGTT CTACCTCGCG
GTGTTCTGGG CTTTGAACAC GGTGGGTTGG CTCACCTTCT ACTGGCATTG GAAGCACCTT
GCGATTTGGT CTGGCAACGT TGCCCAGTTC AACGAATCCA GCACCTATCT CATGGGTTGG
TTCCGCGACT ACCTGTGGCT GAATTCCTCC CAGTTGATCA ACGGGTATAA CCCGTTTGGC
AGCAACAACC TGGCCGTTTG GTCTTGGATG TTCCTGTTCG GTCACCTGGT ATGGGCGACA
GGTTTCATGT TCCTGATTTC CTGGAGAGGT TATTGGCAGG AACTGATTGA GACCATCGTT
TGGGCTCATC AGCGCAGCCC TATCGCCAAC ATGATGGGTT GGCGTGATAA GCCTGTGGCT
CTCTCGATTG TCCAGGCAAG GGTTGTGGGT CTTGCTCACT TCTCGGTTGG TTACGTACTC
ACCTACGCGG CCTTCCTCAT AGCCTCGACC TCAGGCAAGT TCGGTTGA
 
Protein sequence
MATKFPSFSQ GLAQDPTTRR IWYGIATAHD FESHDGMTEE RLYQKLFSTH FGHLAIIGLW 
VSGNLFHIAW QGNFEQWVAD PLHVRPIAHA IWDPHFGQGA IDAFTQAGAS SPVNIAYSGL
YHWFYTIGMT TNAELYQGSI FMMILSAWAL FAGWLHLQPK FRPSLAWFKN AESRLNHHLA
VLFGFSSIAW TGHLVHVAIP ESRGQHVGWD NFLSVMPHPA GLGPFFTGNW GVYAQNPDSM
NQVFGSTEGS GTAILTFLGG FHPQTEALWL TDIAHHHLAI GCLFVIAGHM YRTNFGIGHS
IKEILETHNP PKGTPGDLGA GHKGLYDTIN NSLHFQLGLA LASLGVVTSL VAQHMYAMPS
YAFIAKDYTT SAALYTHHQY IAIALMCGAF AHGAIFFIRD YDPEANKDNV LARMLEHKEA
IISHLSWVSL FLGFHTLGLY VHNDVVVAFG TPEKQILVEP VFAQFVQAAS GKAIYGFDVL
LSNAGGAAAN ANAAYMDGWM GAINGNTDVF LPIGPGDFLV HHAIALGLHT TTLILVKGAL
DARGSKLMPD KKDFGYSFPC DGPGRGGTCD ISAWDAFYLA VFWALNTVGW LTFYWHWKHL
AIWSGNVAQF NESSTYLMGW FRDYLWLNSS QLINGYNPFG SNNLAVWSWM FLFGHLVWAT
GFMFLISWRG YWQELIETIV WAHQRSPIAN MMGWRDKPVA LSIVQARVVG LAHFSVGYVL
TYAAFLIAST SGKFG