Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1994 |
Symbol | psaB |
ID | 3743716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1895343 |
End bp | 1897550 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637772190 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_377995 |
Protein GI | 78185561 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.28805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACGA AATTTCCTTC GTTCAGCCAG GGTCTGGCCC AGGACCCGAC AACCCGCCGT ATTTGGTACG GGATCGCCAC GGCTCACGAC TTCGAGAGCC ATGACGGAAT GACGGAGGAG CGGCTTTATC AAAAGCTCTT CTCCACACAT TTCGGCCATC TCGCGATCAT CGGCCTGTGG GTTTCGGGAA ACCTGTTCCA CATCGCCTGG CAGGGCAACT TCGAGCAGTG GGTCGCCGAC CCTCTGCACG TGCGCCCCAT CGCTCACGCA ATTTGGGATC CCCACTTTGG TCAAGGCGCC ATTGACGCCT TTACCCAAGC TGGTGCTTCC TCCCCAGTGA ACATTGCCTA CTCAGGCCTT TATCACTGGT TTTACACAAT CGGCATGACC ACGAATGCCG AGCTGTATCA AGGATCCATC TTCATGATGA TCCTGTCGGC TTGGGCCCTG TTCGCTGGTT GGTTGCATCT GCAACCCAAG TTCCGTCCTT CTCTTGCTTG GTTCAAAAAC GCTGAGTCGC GTTTGAACCA TCACCTCGCT GTTCTCTTTG GATTCAGCTC CATCGCTTGG ACCGGTCACC TGGTTCACGT GGCGATCCCT GAGTCCCGTG GTCAGCACGT CGGTTGGGAC AATTTCCTCA GCGTGATGCC TCATCCCGCA GGACTTGGCC CTTTCTTCAC CGGCAACTGG GGCGTGTACG CCCAGAACCC CGATTCCATG AATCAGGTGT TCGGGAGTAC AGAAGGATCT GGTACTGCGA TTTTGACCTT CTTGGGTGGT TTTCACCCCC AAACAGAGGC TCTTTGGCTC ACGGACATTG CCCATCACCA TTTGGCGATC GGTTGTTTGT TCGTGATTGC CGGTCACATG TACCGGACCA ACTTCGGTAT TGGTCACTCC ATTAAGGAGA TCCTCGAAAC CCACAATCCT CCCAAGGGCA CTCCTGGGGA TTTGGGGGCT GGCCATAAAG GCCTGTACGA CACCATCAAC AACAGCCTTC ACTTCCAGTT GGGCTTGGCC CTCGCCTCAC TCGGCGTGGT GACCAGCTTG GTGGCGCAGC ACATGTATGC GATGCCGTCG TATGCCTTCA TCGCGAAGGA CTACACAACC TCGGCAGCGC TTTACACCCA CCACCAGTAC ATCGCCATCG CTTTGATGTG TGGTGCCTTC GCTCACGGTG CGATCTTCTT CATTCGTGAT TACGACCCCG AAGCCAATAA GGACAACGTC CTGGCTCGGA TGCTCGAGCA CAAGGAAGCG ATCATTAGTC ACTTGAGCTG GGTGTCTCTC TTCCTCGGGT TCCATACCTT GGGCCTCTAC GTCCATAACG ACGTTGTTGT TGCCTTCGGT ACGCCTGAGA AGCAGATCCT GGTGGAGCCT GTGTTTGCTC AGTTTGTTCA AGCTGCCTCG GGTAAAGCGA TCTATGGCTT TGATGTGCTG CTCTCCAATG CTGGAGGCGC GGCTGCCAAT GCCAATGCCG CTTACATGGA CGGTTGGATG GGCGCAATCA ACGGCAACAC CGATGTGTTC CTGCCGATTG GTCCTGGTGA CTTCCTTGTG CACCACGCCA TCGCTCTTGG ACTCCACACC ACAACCCTCA TCCTTGTGAA GGGTGCGTTG GATGCCCGTG GTTCCAAGCT GATGCCCGAC AAGAAGGATT TCGGCTATTC CTTCCCTTGT GATGGCCCTG GCCGTGGCGG TACCTGCGAC ATCTCAGCTT GGGATGCGTT CTACCTCGCG GTGTTCTGGG CTTTGAACAC GGTGGGTTGG CTCACCTTCT ACTGGCATTG GAAGCACCTT GCGATTTGGT CTGGCAACGT TGCCCAGTTC AACGAATCCA GCACCTATCT CATGGGTTGG TTCCGCGACT ACCTGTGGCT GAATTCCTCC CAGTTGATCA ACGGGTATAA CCCGTTTGGC AGCAACAACC TGGCCGTTTG GTCTTGGATG TTCCTGTTCG GTCACCTGGT ATGGGCGACA GGTTTCATGT TCCTGATTTC CTGGAGAGGT TATTGGCAGG AACTGATTGA GACCATCGTT TGGGCTCATC AGCGCAGCCC TATCGCCAAC ATGATGGGTT GGCGTGATAA GCCTGTGGCT CTCTCGATTG TCCAGGCAAG GGTTGTGGGT CTTGCTCACT TCTCGGTTGG TTACGTACTC ACCTACGCGG CCTTCCTCAT AGCCTCGACC TCAGGCAAGT TCGGTTGA
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Protein sequence | MATKFPSFSQ GLAQDPTTRR IWYGIATAHD FESHDGMTEE RLYQKLFSTH FGHLAIIGLW VSGNLFHIAW QGNFEQWVAD PLHVRPIAHA IWDPHFGQGA IDAFTQAGAS SPVNIAYSGL YHWFYTIGMT TNAELYQGSI FMMILSAWAL FAGWLHLQPK FRPSLAWFKN AESRLNHHLA VLFGFSSIAW TGHLVHVAIP ESRGQHVGWD NFLSVMPHPA GLGPFFTGNW GVYAQNPDSM NQVFGSTEGS GTAILTFLGG FHPQTEALWL TDIAHHHLAI GCLFVIAGHM YRTNFGIGHS IKEILETHNP PKGTPGDLGA GHKGLYDTIN NSLHFQLGLA LASLGVVTSL VAQHMYAMPS YAFIAKDYTT SAALYTHHQY IAIALMCGAF AHGAIFFIRD YDPEANKDNV LARMLEHKEA IISHLSWVSL FLGFHTLGLY VHNDVVVAFG TPEKQILVEP VFAQFVQAAS GKAIYGFDVL LSNAGGAAAN ANAAYMDGWM GAINGNTDVF LPIGPGDFLV HHAIALGLHT TTLILVKGAL DARGSKLMPD KKDFGYSFPC DGPGRGGTCD ISAWDAFYLA VFWALNTVGW LTFYWHWKHL AIWSGNVAQF NESSTYLMGW FRDYLWLNSS QLINGYNPFG SNNLAVWSWM FLFGHLVWAT GFMFLISWRG YWQELIETIV WAHQRSPIAN MMGWRDKPVA LSIVQARVVG LAHFSVGYVL TYAAFLIAST SGKFG
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