Gene Syncc9902_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1989 
Symbol 
ID3741834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1889587 
End bp1890549 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content59% 
IMG OID637772185 
Productglycosyl transferase family protein 
Protein accessionYP_377990 
Protein GI78185556 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.151695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAC CCCTAGACCT ATCGGTGGTG GTGCCCCTCT ACAACGAAGA GGAAAGCCTG 
CCTCACCTCG TAGAGCAACT GCTGGCGGCG CTCCGTCCAA GCGGCGAACG CTTCGAACTT
GTCCTGGTGA ATGACGGCTC CAGTGACCGA ACTGCCGAGG TGCTCGAGCG CTTAAGCCGA
GACATCCCTG AGCTCGTCGG GGTGCTGCTT CGTAAAAACT ACGGACAAAC CGCTGCCATG
GCCGCTGGCT TTGATGTGGC TCAGGGCGAA GTGATCGTGA GCCTGGACGG CGACCTTCAG
AACGATCCAG CCGACATCCC GATGCTGCTG GCCAAACTGC GTGAGGGATA CGACCTCGTC
AGCGGTTGGA GGCACCAACG CCAGGATGCT GCACTGCAAC GCAAGCTTCC CTCCAAGATC
GCCAACCGTC TGATCGGTCG TGTGACGGGG GTCCGCCTTC ACGACTACGG CTGTTCACTC
AAGGCCTACA AACGTGACGT GCTCTCCGAC ATGCGTCTCT ACGGAGAACT GCACAGATTT
TTGCCAGCCC TGGCCTTCAT CGAGGGTGCT CGCATCACGG AAGTGAAGGT GAACCACCGG
GCCCGTCAGT TCGGCAGCAG CAAGTACGGC ATCGACCGCA CCTTCCGCGT GCTGATGGAC
CTGCTCACGG TGTGGTTCAT GAAGCGTTTC CTAACCCGAC CGATGTACGT CTTTGGTTTC
GGTGGGCTCA TTGCCATCCT TTTGAGCCTC GTGGCCAGCA GCTACCTCCT GGCGGTGAAA
CTCATGGGGG GTGATATCGC GAACCGGCCT TTACTCACTC TTGCTGTGGT TCTTGGGCTG
GCGGGGATCC AACTGTTCTG CTTTGGGCTC CTTGGCGAAC TACAAATCAG GACGTATCAC
GAAAGTCAGG ATCGACCGAT CTATCGCATC CGTGAAACGT TGCGAGGCGG ACGAGATGCC
TGA
 
Protein sequence
MSAPLDLSVV VPLYNEEESL PHLVEQLLAA LRPSGERFEL VLVNDGSSDR TAEVLERLSR 
DIPELVGVLL RKNYGQTAAM AAGFDVAQGE VIVSLDGDLQ NDPADIPMLL AKLREGYDLV
SGWRHQRQDA ALQRKLPSKI ANRLIGRVTG VRLHDYGCSL KAYKRDVLSD MRLYGELHRF
LPALAFIEGA RITEVKVNHR ARQFGSSKYG IDRTFRVLMD LLTVWFMKRF LTRPMYVFGF
GGLIAILLSL VASSYLLAVK LMGGDIANRP LLTLAVVLGL AGIQLFCFGL LGELQIRTYH
ESQDRPIYRI RETLRGGRDA