| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1978 |
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| Symbol | |
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| ID | 3741823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1881366 |
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| End bp | 1882304 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637772174 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_377979 |
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| Protein GI | 78185545 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.253018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCAGT ACCAGATCGA TCGCATCGAG CATCAAATCG CCGAGGATCG CGCCCAAACA
GGCGTCTTCC TGATCGGTCC ACTCGAGCGT GGCCAAGCCA CAACCTTGGG CAATGCTTTG
CGCCGTGTCC TGATGGGCGG CCTTGAAGGC AGCGCCGTCA CCGCAATTCG CATTGCCGGC
GTTAACCACG AGTACGCCAC AGTCCCTGGG GTTCGTGAAG ACGTCCTCGA CATTCTGCTG
AACTGCAAAG AGCTGTCTGT TAACAGCCGT TCAGCGGAAC TCGAGATTGG TCGTCTGGTG
GTCGCTGGTC CTGCTGAAGT AAAGGCCAGC GATCTTCAGT TTTCATCTCA AGTTCAAGTT
ATCGATGGCA ATCGCACCAT CGCAACCGTC GCAGACGGAC ACAGCCTGGA ATTGGAAGTT
CACGTCGAGC GTGGCATCGG CTATCGCCCA GTCGACCGAC ACAACGAAGA CACCAGTGCC
ATTGATCTTC TACAGATCGA TGCGGTGTTT ATGCCGGTGA AGCGAGTCAA TTTCAATATT
GATGAAACAG CCGTTGCAGA AGGCGGTTCA GCCCGCGAAC GCCTACGGAT TGAGATCAGC
ACCGATGGCT CCATTACTCC TGACGACGCC CTGGCTCAGA CGGCCAATCA ACTGCTCGAG
CTCTTCCAAC CTCTAGCGAC CGTCACCCTC GTAGAAGAAG TGGGTGTCGA GCCGGAACCA
TCTGCAGAGG CACAGATTCC TCTCGAGGAA TTGAACCTCT CGGTTCGGGC TTACAACTGC
CTCAAGCGTG CCCAGGTCAA CTCCGTGTCT GACCTCATGG GCTTCAGCTA TGAGGATCTC
CTCGAAATCA AGAACTTCGG TTCTAAATCC GCCGACGAAG TGATCGAAGC CCTCGAGCGC
ATCGGCATCT CTATCCCCCA AAGCCGCACC TCGGCATAA
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| Protein sequence | MLQYQIDRIE HQIAEDRAQT GVFLIGPLER GQATTLGNAL RRVLMGGLEG SAVTAIRIAG
VNHEYATVPG VREDVLDILL NCKELSVNSR SAELEIGRLV VAGPAEVKAS DLQFSSQVQV
IDGNRTIATV ADGHSLELEV HVERGIGYRP VDRHNEDTSA IDLLQIDAVF MPVKRVNFNI
DETAVAEGGS ARERLRIEIS TDGSITPDDA LAQTANQLLE LFQPLATVTL VEEVGVEPEP
SAEAQIPLEE LNLSVRAYNC LKRAQVNSVS DLMGFSYEDL LEIKNFGSKS ADEVIEALER
IGISIPQSRT SA
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