Gene Syncc9902_1972 details

Gene Information

• Locus tag: Syncc9902_1972
• Symbol: rplO
• ID: 3741817
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1877779
• End bp: 1878234
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637772168
• Product: 50S ribosomal protein L15
• Protein accession: YP_377973
• Protein GI: 78185539
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCTCC GACTCGACTC CCTCAAAGCC AACAAAGGCG CTCGTCGCCG CAAATTGCGT 
AAGGGCCGTG GCATTGCCGC TGGTCAGGGC GCTAGCTGCG GCTTCGGTAT GCGTGGCCAA 
AAATCCCGCT CCGGCCGACC AACCCGTCCT GGGTTCGAAG GTGGACAGAT GCCTTTGTAC 
CGCCGGGTAC CAAAGCTGAA GCACTTTCCT TTGGTTAATC CAAAGCACTT CACGGTGTTA 
AACGTGTCCG CCTTGAAAGA TCTCAAGGAC GGAGCAACCG TGAATCTGGA CTCCCTCGTC 
AAAGACGGCA TCGTGACGAG CCCCAAGCAT CCCCTCAAGA TGCTCGGTAA CGGTGAGCTC 
ACCGTTAAGA ACCTGACGGT GCAAGCCTCG GCGTTCACAA CCTCCGCCCG CACCAAGATC 
GAAGCGGCCG GCGGCACCTG CGAAACCCTT GACTGA 

 

Protein sequence

MTLRLDSLKA NKGARRRKLR KGRGIAAGQG ASCGFGMRGQ KSRSGRPTRP GFEGGQMPLY 
RRVPKLKHFP LVNPKHFTVL NVSALKDLKD GATVNLDSLV KDGIVTSPKH PLKMLGNGEL 
TVKNLTVQAS AFTTSARTKI EAAGGTCETL D