| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1970 |
|---|
| Symbol | rplR |
|---|
| ID | 3742246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1876742 |
|---|
| End bp | 1877110 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637772166 |
|---|
| Product | 50S ribosomal protein L18 |
|---|
| Protein accession | YP_377971 |
|---|
| Protein GI | 78185537 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAC TTTCCCGCAA ACAACAGACG CAGAAGCGCC ATCGGCGCCT CCGTCGTCAC
ATCACCGGCA CATCCAACCG TCCGCGGTTG GCTGTGTTTC GCTCCAACAA TCACATCTAC
GCCCAGCTCA TCGACGACGC TGCTCAGAGC ACACTCTGTT CAGCATCCAC CGTTGACAAG
GAACTTCGTT CTGGACTCAA AAACAACGCT GGAAGTTGTG ACGCCTCCGT TGCTGTCGGT
GCACTTGTCG CCAAGCGCGC GATCGCCAAG GGCATCGAGC AGGTGGTCTT CGATCGTGGT
GGAAACCTCT ATCACGGTCG GATTAAAGCC CTTGCCGACG CTGCCCGGGA AGCGGGCCTT
CAGTTCTGA
|
|---|
| Protein sequence | MSKLSRKQQT QKRHRRLRRH ITGTSNRPRL AVFRSNNHIY AQLIDDAAQS TLCSASTVDK
ELRSGLKNNA GSCDASVAVG ALVAKRAIAK GIEQVVFDRG GNLYHGRIKA LADAAREAGL
QF
|
|---|
| |