Gene Syncc9902_1969 details

Gene Information

• Locus tag: Syncc9902_1969
• Symbol: rplF
• ID: 3742245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1876169
• End bp: 1876708
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637772165
• Product: 50S ribosomal protein L6
• Protein accession: YP_377970
• Protein GI: 78185536
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGCA TTGGAAAAAA CCCTGTCCCC GTCCCGGACA AAGTCACTGT TTCCCTCGAC 
GGTCTAACCG TCAAAGTGAA GGGACCAAAA GGTGAGCTCG AGCGCACTCT TCCAGAGGGC 
GTCAGCGTTA GCCAAGAAGC CAACACGATC GTTGTCGCAC CCACGAGCAC CAAACGGATC 
TCACGGGAAC GCCACGGCCT GAGTCGCACC CTCGTCGCCA ACATGATCGA AGGCGTTCAC 
AACGGCTACA GCAAAGCCCT TGAAATTGTT GGTGTGGGCT CCCGAGCCCA GGTCAAGGGA 
ACAACCCTCG TCGTGAGTGC TGGTTACAGC CATCCCGTCG AGATGCCAGC GCCAGCCGGC 
ATCACCTTCA AGGTGGAGAA CAACACCAGG GTGATTGTTT CCGGGATCGA TAAAGAATTG 
GTTGGCAACG AGGCCGCCAA GGTTCGCGCC ATTCGTCCTC CCGAGCCTTA CAAAGGCAAA 
GGCATCAAAT ACGAGGGCGA GCACATCCTG CGAAAGGCAG GCAAGTCCGG CAAGAAATAA 

 

Protein sequence

MSRIGKNPVP VPDKVTVSLD GLTVKVKGPK GELERTLPEG VSVSQEANTI VVAPTSTKRI 
SRERHGLSRT LVANMIEGVH NGYSKALEIV GVGSRAQVKG TTLVVSAGYS HPVEMPAPAG 
ITFKVENNTR VIVSGIDKEL VGNEAAKVRA IRPPEPYKGK GIKYEGEHIL RKAGKSGKK