Gene Syncc9902_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1968 
SymbolrpsH 
ID3742244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1875753 
End bp1876154 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content57% 
IMG OID637772164 
Product30S ribosomal protein S8 
Protein accessionYP_377969 
Protein GI78185535 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACC ACGATCCAAT TTCAGACATG CTCACCCGCA TTCGTAATGC GAGTGAAAAG 
CGTCACGAGA CCACCAAGGT TCCCGCTTCA CGGATGACCC GCAGCATCGC GAAAGTGTTG
CAGCAAGAGG GTTTCATCTC CGAAATCAAC GAAGAAGGCG AAGGCTTCAG AGCCGAATTG
GTGCTCTCCC TCAAATACAG CGGTAAGCAC CGTTTGCCCA CCATTCGCTC CATGCAGCGT
GTGAGCAAGC CAGGCCTCCG CATCTACAAG AACACTCGTG GCCTGCCCAA GGTCCTCGGA
GGGCTTGGTG TCGCGATCAT CTCTACCTCG AAAGGGGTGA TGAGTGACCG CGATGCTCGC
CGAGAGGGCG TCGGCGGCGA AGTGCTCTGT TACGTCTACT GA
 
Protein sequence
MANHDPISDM LTRIRNASEK RHETTKVPAS RMTRSIAKVL QQEGFISEIN EEGEGFRAEL 
VLSLKYSGKH RLPTIRSMQR VSKPGLRIYK NTRGLPKVLG GLGVAIISTS KGVMSDRDAR
REGVGGEVLC YVY