Gene Syncc9902_1962 details

Gene Information

• Locus tag: Syncc9902_1962
• Symbol: rplP
• ID: 3742238
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1873440
• End bp: 1873916
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637772158
• Product: 50S ribosomal protein L16
• Protein accession: YP_377963
• Protein GI: 78185529
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGAGTC CAAAACGCGT CAAATTCCGT AAACAACAGC GAGGCCGCAT GCGCGGCGTC 
GCCACCAGGG GCAACACGAT TGCTTTTGGT GAGTTTGCAC TGCAAGCCCA AGAGTGTGGC 
TGGATCACCT CGCGTCAAAT CGAGGCCAGC CGCCGTGCCA TGACCCGCTA CGTCAAACGT 
GGCGGCAAGA TCTGGATTCG GATTTTTCCC GATAAGCCAG TCACCATGCG CGCCGCTGAA 
ACCCGTATGG GTTCCGGCAA AGGCAACCCA GAATTCTGGG TCGCAGTGAT TAAGCCAGGT 
CGGATTCTCT TCGAGATGGG TGGTGAAGAA ATCACCCCCG AAATCGCGAA AGAAGCCATG 
CGCCTGGCGC AATACAAGCT GCCAGTCAAA ACCAAATTCA TCGCCCTCGG TGATGAGGAG 
AAAACAGCTG GCGCCAAAAC ACCGGCTGCT TCTAAAGCCG TCACCGTGGA GTCCTGA 

 

Protein sequence

MLSPKRVKFR KQQRGRMRGV ATRGNTIAFG EFALQAQECG WITSRQIEAS RRAMTRYVKR 
GGKIWIRIFP DKPVTMRAAE TRMGSGKGNP EFWVAVIKPG RILFEMGGEE ITPEIAKEAM 
RLAQYKLPVK TKFIALGDEE KTAGAKTPAA SKAVTVES