| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1933 |
|---|
| Symbol | |
|---|
| ID | 3743813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1847488 |
|---|
| End bp | 1850475 |
|---|
| Gene Length | 2988 bp |
|---|
| Protein Length | 995 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637772128 |
|---|
| Product | phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_377934 |
|---|
| Protein GI | 78185499 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGT CCACCGCCCA TGCACTCCAA GGCGAACAGC CCAGGGAGAG CGGTGTGACT
GCTGGAGCCG GCCGATTGCT GCAGAACCGC TTGGTGTTGG TCGAAGACCT TTGGCAAACG
GTTCTCCGCA GCGAGTGTCC CCCAGAACAA AGTGCTCGCC TCCTCCGACT AAAACAACTG
AGTGATCCCG TGGCCCTTGA GGGGCGAGAC GGTGACAGCA CAAGCGAGGC GATTGTTGAA
TTGATCCGTG CCATGGATCT TTCAGAAGCC ATTGCCGCGG CCAGAGCGTT CTCGCTGTAT
TTCCAACTCA TCAACATCCT CGAACAACGC ATCGAGGAAG ACAGTTATCT CGACAGCCTG
GCCCCCCGGA AATCAGCAGC AGACGACGGC CGCGACGCCT TTGACCCTTT TGCTCCTCCT
TTGGCGAGTC AGACCGATCC CGCCACATTT GGAGAAGTTT TTGAACGGCT CCGGCGGATG
AATGTGCCGC CAGCACAAGT CGAAGCCCTA CTCCAGGAGT TGGATATCCG GTTGGTCTTT
ACCGCTCATC CCACAGAGAT TGTTCGGCAC ACCGTCCGTC ACAAGCAACG ACGGGTCGCG
AATCTTCTGC AACAACTGCA GTCCGACTCG CCTATGGCGC TTCAAGTCAA AGACGACTTG
CGTCAGCAAC TGGAAGAGGA GATTCGACTC TGGTGGAGAA CCGATGAGCT GCATCAGTTC
AAGCCAACGG TTCTCGATGA AGTGGATTCA ACCCTTCATT ACTTCCAACA AGTGTTGTTC
GATGCCATGC CCCAACTACG GCGACGGCTC ACATCATCAC TTCACCGGCA CTATCCCGAT
GTCCAAGTTC CCCAGGCATC GTTCTGCACC TTTGGATCTT GGGTTGGTTC CGACCGGGAT
GGCAATCCCT CCGTCACAAC GGACATCACC TGGCGGACCG CCTGCTATCA GCGTCAGCTC
ATGCTCGAGC TGTACATCAG CTCGGTCCAG GCGCTTCGTA ATCAGCTGAG CATTTCAATG
CAGTGGAGCC AGGTTGCTCC TGCGTTGCTG GAGTCCTTGG AAATGGATCG GCTGCGCTTC
CCAGAGATCT ATGAGCGGCG CGCGGCGCGT TACCGACTAG AGCCTTACCG ACTAAAGCTG
AGCTACATCC TCGAACGCCT GGAACGCACG CTTAAGCGCA ACGATCAGCT CTCAGATGCG
GGGTGGAAGA GTCCTAAAGA TGCCATCCCA ACCGATGGAC CGCCTGGATC GGAAGCGCTC
CACTACACCT CGGTCGATCA ATTCCGAAAC GACCTGGAAC TGATCCGCAA CAGCTTGATC
GGCACTGAAC TCACCTGCGA GCAGCTCGAT ACCTTGCTCC ATCAAGTCCA TATCTTTGGC
TTCTCACTCG CCAGTCTCGA TATTCGTCAG GAGAGCACCC GCCATAGCGA TGCGATTGAC
GAACTCACGC GTTTTCTCGA ATTACCACAG CCCTATGGCG AGATGGAAGA GTCCACGCGT
GTGGCCTGGT TGATTGAAGA GCTCCGTACC CGGCGTCCGT TGATTCCAAC GGCAGTTCGA
TGGTCGGACA CCACCGCGGA GACGATGGCC GTCTTCCGCA TGTTGCATCG ACTCCAAGAG
GAGTTCGGCC AGCGGATCTG CCACTCGTAT GTGATTTCGA TGAGCCACAC GGCCTCCGAT
CTATTGGAGG TGTTACTGCT CGCGAAGGAA GCAGGACTCG TGGATCCAGC CGCCCGCAAA
GCGTCGCTGC TGGTGGTGCC ACTGTTCGAA ACGGTGGAAG ATCTACAACG CGCACCAGCC
GTCATGGACG AGCTGTTCAA TACACCTCTT TATCGCGACC TACTCCCGAT GGTGGGGATC
CAAGGCCAGC CCCTACAGGA GCTAATGCTT GGCTACTCCG ACAGCAATAA AGACTCAGGT
TTCCTCTCGA GCAACTGGGA GATTCACCAA GCTCAACTTG CCCTCCAAGA GCTGTCCAGT
CGACAGGGCG TTGCCCTTCG ACTGTTTCAT GGTCGCGGCG GTTCCGTGAG CCGTGGCGGT
GGCCCGGCGT ATCAAGCCAT CCTTGCCCAG CCCAGTGGCA CCCTTCAGGG CCGCATCAAA
ATCACCGAAC AAGGGGAGGT GCTGGCTTCG AAGTACAGCC TGCCGGAGCT CGCCCTCTAC
AACCTGGAAA CAGTCACCAC CGCGGTCGTT CAAAACAGCC TGGTAACCAA TCAGCTCGAT
GCGACACCGA GCTGGAACCA ACTCATGAGT CGTCTCTCTG CACGCTCCCG TGAGCACTAC
CGCGCGTTGG TACATGACAA CCCCGACTTG GTGGCATTTT TCCAACAGGT GACACCAATC
GAAGAGATCA GCAAACTGCA GATTTCCAGT CGACCTGCTC GACGTAAAAC CGGAGCCAAA
GATCTTTCAA GCTTGCGGGC GATTCCTTGG GTGTTTGGCT GGACGCAAAG CCGTTTTTTA
CTTCCCAGTT GGTTTGGCTT TGGCACAGCT TTAGCTGAAG AGGTGAAAGC AGACCCCGAT
CAACTCGATC TGCTCCGGCG GCTTCACCAA CGCTGGCCCT TTTTCCGCAC CCTGATTTCC
AAGGTGGAGA TGACCCTCTC CAAAGTGGAT CTCGACTTAG CGCATCACTA CATGAACAGC
CTGGGGAAAC CCGAGCAACG TGAGGCCTTC GAGGCGATTT TTGCGGTGAT TGCAACGGAA
TACGCGTTAA CGCGGAAATT GGTTTTAGAG ATCACAGGAC AACCGCGCCT ACTCGGGGCT
GATCAAGGGC TTCAGCTCTC AGTCGACCTG AGGAATCGCA CGATTGTGCC TTTGGGCTTT
CTCCAGGTTG CGCTGCTCAA ACGGCTGCGG GATCAAAACC GTCAGCCACC AATGAGTGAA
AGTCCAGGAG CACCCGAAGA CACCCGTACC TACAGCCGCA GTGAGTTACT CCGTGGGGCC
CTGCTCACGC TGAATGGGAT TGCTGCTGGC ATGCGCAACA CAGGCTGA
|
|---|
| Protein sequence | MPESTAHALQ GEQPRESGVT AGAGRLLQNR LVLVEDLWQT VLRSECPPEQ SARLLRLKQL
SDPVALEGRD GDSTSEAIVE LIRAMDLSEA IAAARAFSLY FQLINILEQR IEEDSYLDSL
APRKSAADDG RDAFDPFAPP LASQTDPATF GEVFERLRRM NVPPAQVEAL LQELDIRLVF
TAHPTEIVRH TVRHKQRRVA NLLQQLQSDS PMALQVKDDL RQQLEEEIRL WWRTDELHQF
KPTVLDEVDS TLHYFQQVLF DAMPQLRRRL TSSLHRHYPD VQVPQASFCT FGSWVGSDRD
GNPSVTTDIT WRTACYQRQL MLELYISSVQ ALRNQLSISM QWSQVAPALL ESLEMDRLRF
PEIYERRAAR YRLEPYRLKL SYILERLERT LKRNDQLSDA GWKSPKDAIP TDGPPGSEAL
HYTSVDQFRN DLELIRNSLI GTELTCEQLD TLLHQVHIFG FSLASLDIRQ ESTRHSDAID
ELTRFLELPQ PYGEMEESTR VAWLIEELRT RRPLIPTAVR WSDTTAETMA VFRMLHRLQE
EFGQRICHSY VISMSHTASD LLEVLLLAKE AGLVDPAARK ASLLVVPLFE TVEDLQRAPA
VMDELFNTPL YRDLLPMVGI QGQPLQELML GYSDSNKDSG FLSSNWEIHQ AQLALQELSS
RQGVALRLFH GRGGSVSRGG GPAYQAILAQ PSGTLQGRIK ITEQGEVLAS KYSLPELALY
NLETVTTAVV QNSLVTNQLD ATPSWNQLMS RLSARSREHY RALVHDNPDL VAFFQQVTPI
EEISKLQISS RPARRKTGAK DLSSLRAIPW VFGWTQSRFL LPSWFGFGTA LAEEVKADPD
QLDLLRRLHQ RWPFFRTLIS KVEMTLSKVD LDLAHHYMNS LGKPEQREAF EAIFAVIATE
YALTRKLVLE ITGQPRLLGA DQGLQLSVDL RNRTIVPLGF LQVALLKRLR DQNRQPPMSE
SPGAPEDTRT YSRSELLRGA LLTLNGIAAG MRNTG
|
|---|
| |