Gene Syncc9902_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1922 
Symbol 
ID3743802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1836708 
End bp1837352 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content57% 
IMG OID637772117 
Product3'-5' exonuclease 
Protein accessionYP_377923 
Protein GI78185488 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0431536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGTT CTCCTTCCAT TCCTGCCGAG TTCGCTGTGT TCGATGGGGA CTTGGATGCG 
TCTTGGACGG AGCGTTATCT CCAAATGCCT TGTCTTGCGG TCGATACCGA AGCCATGGGC 
CTGATCCATG GCCGCGACCG CCTCTGTTTG GTTCAGATCG CTGATGCACA GGATCGTGTC 
GCGTGTGTGC GCATCGCTTT GGGTCAATCC ACTGCTCCCA ACCTTCAGCG TTTGTTTGAG 
GCGCCATCGG TGGAGAAGGT GTTTCACTTC GCTCGGTTCG ATGTGGCAGC CCTCGCGGCT 
GGGCTTGATA TTGCTGTTCA GCCTTTGTTT TGCACCAAGG TTGGTAGCCG CTTGGGGCGG 
ACATACACGC CCCGACATGG CCTCAAGGAT CTCGTAATGG AACTGGTGGG AGTCGAGCTC 
GACAAGGGAG CGCAGAGTAG TGACTGGGGA CGGGTGGATG AGCTCACTGA TGTTCAGCTC 
GCCTATGCCG CTAATGATGT GCGTTACCTC CTCCCAGCGA GGAACAAGCT GGAAACGATG 
CTGCGTCGGG AGGGGCGTTG GGAGTTGGCG CAACGTTGTT TTGCCTGTAT TCCCGTGATG 
GCTGAATTGG ACCGGATGCG GTTTAACCAA ACCTTCGAGC ATTGA
 
Protein sequence
MAGSPSIPAE FAVFDGDLDA SWTERYLQMP CLAVDTEAMG LIHGRDRLCL VQIADAQDRV 
ACVRIALGQS TAPNLQRLFE APSVEKVFHF ARFDVAALAA GLDIAVQPLF CTKVGSRLGR 
TYTPRHGLKD LVMELVGVEL DKGAQSSDWG RVDELTDVQL AYAANDVRYL LPARNKLETM 
LRREGRWELA QRCFACIPVM AELDRMRFNQ TFEH