| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1918 |
|---|
| Symbol | |
|---|
| ID | 3743798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 1833717 |
|---|
| End bp | 1834700 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637772113 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_377919 |
|---|
| Protein GI | 78185484 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.228007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCA AAGGCTCGTG CCGGTTGAAC AGCATCGGTT TTGGAACTTG GGCTTGGGGC
AATGAATTTG TTTGGGGGTA TGACCCAAAC AGGGACGATG GGCGCCTAGC TGCCACGTTT
CGCCAAGCCC TTAGCTCAGG ACTCAACCTC ATCGACACGG CCGATTCTTA CGGGACGGGT
CGTTTAAACG GTCGCAGCGA AAGTCTTCTG GGAGGCTTTA TTGAGGCTTT ACCGGCTTCG
CGTCGCTCTC AGTTAGTGGT GGCGACAAAG TTGGCTCCTT TCCCCTGGCG TCAGGGGAGA
AGGGGGCTGG ATCGTGCTTT TAATGCCAGC CAAAAGCGAT TAGGTGGTTA TCTGAAGCGG
GTGCAATTGC ACTGGAGTAC AGCGCGGTAT GCGCCCTGGC AGGAAGCTGC GCTTTTGGAT
GGTTTGGCTG ATCTGGTTCA GGCTCAGCAA GTGGACGAGC TGGGGGTATC GAATGTGGGG
GCTCGCCGTT TGCTTTGGAT GCAGGCCCGG CTGAGGGAGC GAGGGGTGAA GCTCAGCAGT
GTGCAGATCC AATGGTCATT GCTCTCTCCG GGAGTGGCGC CAGCGCAAGA GTTGTTGGAT
CTTTGTCAGG CGCTGGATAT TGAAGTGTTG GCCTACAGCC CATTGGCCTT CGGGGTGCTG
GGCTGTACTC CGGGTGATAC ACCTCGGCCG TCCACCTGGC TACGCCAACG ACTGTTTCGC
CGACTCTTGC CGGAGAGTCT TCCAATCAGG CAGCTGCTCG CAGCTATCGC GAGAGAGCGT
GGGGTATCGA TGGTTCAGGT GGCCTTGAAT TGGTGTCGAG CCACTGGAAC AACACCAATT
CCCGGTATTC GATCGCCCCG GCAAGCCATG GATGCGGCAG CAGCACTCAC CTGGCAATTG
TCGGAGGCTG AATGCTTTGC GTTAAACCAA GCCAGAGAGC GATGCCTTGC ACGCATGCCC
TCGAATCCGT TTCAAAGCCG TTGA
|
|---|
| Protein sequence | MAGKGSCRLN SIGFGTWAWG NEFVWGYDPN RDDGRLAATF RQALSSGLNL IDTADSYGTG
RLNGRSESLL GGFIEALPAS RRSQLVVATK LAPFPWRQGR RGLDRAFNAS QKRLGGYLKR
VQLHWSTARY APWQEAALLD GLADLVQAQQ VDELGVSNVG ARRLLWMQAR LRERGVKLSS
VQIQWSLLSP GVAPAQELLD LCQALDIEVL AYSPLAFGVL GCTPGDTPRP STWLRQRLFR
RLLPESLPIR QLLAAIARER GVSMVQVALN WCRATGTTPI PGIRSPRQAM DAAAALTWQL
SEAECFALNQ ARERCLARMP SNPFQSR
|
|---|
| |