Gene Syncc9902_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1912 
Symbol 
ID3742755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1828444 
End bp1829076 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content57% 
IMG OID637772107 
Productphycocyanobilin lyase beta subunit 
Protein accessionYP_377913 
Protein GI78185478 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCAT CTGCTCTCCA GAAGGCCATC CTTGCGTTGG ACCGCGCAAC AACGACCTCC 
GAACTCGTTA AGGCCACGCA AACCATTTGT GGCTTGAAGG ATCTTGAAGC AGCACCCACG 
CTGATCAAAG TTCTTGGCTT CAACAATCCT GCTGTAGGAG CCGTTGCAAC CCAGGGCCTG 
ATCGCCCTTG GCCGTGATGT TGTGCCGATC CTGGTTGTGA ATTTGGATGT TGGTAATTAC 
GGCGCAAGGG CTTGGGTGGT GCGAGCCATC GCCACGCTGC GAGACCCTCG CGGACTCGAC 
CTGCTGGAGC ATGCGCTCAA CGCCGACATT GCACCAAGCG TGCGCCGCTC CGCCACTCGT 
GGGTTGGCGG AGATGGAGCT CGAAGGTTCG AACGTCTCCA AAGATTTTTC AAGGTGTTGT 
GAAGCCCTGT TCAAAGCAGC TGCGGATGAT GAGTGGATCG TGCGTTACGC CGCGGCCTTC 
GGCCTTGAGC AACGATTCGG CCACAACTCA ACAAATACCG GGCTGAAAAC CCAAGCCATC 
GCTCATTTGG AGGAGCTCAG TTCGAATTCA GAGGCTGTCA AGGTGGTGAA ACAGCGGGCA 
AAGCTCGCGT TGCAACGTCT TCAAGCCGGA TGA
 
Protein sequence
MSASALQKAI LALDRATTTS ELVKATQTIC GLKDLEAAPT LIKVLGFNNP AVGAVATQGL 
IALGRDVVPI LVVNLDVGNY GARAWVVRAI ATLRDPRGLD LLEHALNADI APSVRRSATR 
GLAEMELEGS NVSKDFSRCC EALFKAAADD EWIVRYAAAF GLEQRFGHNS TNTGLKTQAI 
AHLEELSSNS EAVKVVKQRA KLALQRLQAG