| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1909 |
|---|
| Symbol | |
|---|
| ID | 3742752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1826501 |
|---|
| End bp | 1826989 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637772104 |
|---|
| Product | phycocyanin, alpha subunit |
|---|
| Protein accession | YP_377910 |
|---|
| Protein GI | 78185475 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01338] phycocyanin, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC CCCTTACCGA AGCTGTTGCA GCGGCTGATT CCCAGGGCCG TTTCCTGAGC
AACACAGAAG TCCAAGCCGC ATCAGGTCGC TTTAACCGCG CCAAAGCAAG TCTTGAAGCC
GCGAAAGGCC TCACCAGCAA AGCCGATGCT TTGGTGAATG GTGCAGCCCA AGCTGTTTAC
AGCAAGTTCC CCTACACCAC TCAGATGGAT GGGGCGAACT ACGCCTCCAC CCCAGAAGGC
AAAGCCAAGT GCTCCCGTGA CGTTGGTTAT TACCTGCGCA TGATCACCTA CTGCTTGGTA
GCAGGCGGTA CTGGCCCTAT GGACGACTAC TTGATTGCTG GTTTGAGCGA AATCAACCGC
ACCTTCGAGC TCTCACCTTC TTGGTATGTC GAAGCTCTGA AGCACATCAA GGCGAACCAC
GGCCTCAGCG GCGACGCTGC CACCGAAGCC AACAGCTACA TCGACTACGC CGTCAATTCA
CTGACCTGA
|
|---|
| Protein sequence | MKTPLTEAVA AADSQGRFLS NTEVQAASGR FNRAKASLEA AKGLTSKADA LVNGAAQAVY
SKFPYTTQMD GANYASTPEG KAKCSRDVGY YLRMITYCLV AGGTGPMDDY LIAGLSEINR
TFELSPSWYV EALKHIKANH GLSGDAATEA NSYIDYAVNS LT
|
|---|
| |