Gene Syncc9902_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1896 
Symbol 
ID3742739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1817135 
End bp1818031 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content45% 
IMG OID637772091 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_377897 
Protein GI78185462 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGCAG AAGCATCTAG TCATCCAATC AATGCGGTAG AGCAACTTAC AGAGCAAGAA 
GCGTACGAAC TAGCCGAAGA GTTAAAACTG AAACTCGCAG AGCAGATAGT ACCAAGTTCA
GATCAAGAAT CAATCCAAAA GATGGTGGCT GGGCTCGGGG ATCCACGAGG TGCTCTCCGC
CTCACCTTTG CACAAAGTCT TGGGAATATC GGGGCAGCAG CTATTCCCTT ACTTTGCGAT
TCCCTAAAGA ACAGCCCCAA TATTTTAATC CGACGCGCAT CTGCAAAAAC ACTGAATATT
ATTGGCAGTA AAGTAGCATT GCCAAATCTA ATTGAAGCAT TTCGAACAGA TGACGACCCT
GTCGTACAAG GCTCATCAGC TGGCGCAATG GCAACTATTG GGGAACCTGC GATTGAACCA
CTACTAGAAA TACTGACTGA TAACAAGTGC AGCGCATTTC AGGTTGGCCT GATTAACCTT
GCCTTGAGCT TTGCCGGATC AAAAGCTCCT AATGCATTCA ACCAAGCCGC CCAATCAAAT
AATCCTGAGA TAAGAATAGC GGCCCTTACA GCACTGGCCG AACAAGTGCA TTCAGGCACG
AATGATCATG CCAAAGAACT ACTAATTCGA GCCTTAAATG ATGACGCAAG TGAGGTACGT
GCTGAGGCTG CAACAATTAC TGGGAAGACT CTGGAGCTCG AGGAAATAAT TAATGAACTC
TGCAGGCTAC TGAAAGACGA AGACAGTCAA GTAAGAATTA ACACAGCCTT AGCCTTAATG
AAAACAGAGG CAGTATCTTC GATTAGCAAC TTACATGAAG CCCTTTCTTT AGAGGGCAAT
GATCAAGCCA AGTCAGTGAT CAAAGTTGCA ATCAATCAAC TCGAAAAGAT TGGATAG
 
Protein sequence
MAAEASSHPI NAVEQLTEQE AYELAEELKL KLAEQIVPSS DQESIQKMVA GLGDPRGALR 
LTFAQSLGNI GAAAIPLLCD SLKNSPNILI RRASAKTLNI IGSKVALPNL IEAFRTDDDP
VVQGSSAGAM ATIGEPAIEP LLEILTDNKC SAFQVGLINL ALSFAGSKAP NAFNQAAQSN
NPEIRIAALT ALAEQVHSGT NDHAKELLIR ALNDDASEVR AEAATITGKT LELEEIINEL
CRLLKDEDSQ VRINTALALM KTEAVSSISN LHEALSLEGN DQAKSVIKVA INQLEKIG