Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1896 |
Symbol | |
ID | 3742739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1817135 |
End bp | 1818031 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637772091 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_377897 |
Protein GI | 78185462 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCCGCAG AAGCATCTAG TCATCCAATC AATGCGGTAG AGCAACTTAC AGAGCAAGAA GCGTACGAAC TAGCCGAAGA GTTAAAACTG AAACTCGCAG AGCAGATAGT ACCAAGTTCA GATCAAGAAT CAATCCAAAA GATGGTGGCT GGGCTCGGGG ATCCACGAGG TGCTCTCCGC CTCACCTTTG CACAAAGTCT TGGGAATATC GGGGCAGCAG CTATTCCCTT ACTTTGCGAT TCCCTAAAGA ACAGCCCCAA TATTTTAATC CGACGCGCAT CTGCAAAAAC ACTGAATATT ATTGGCAGTA AAGTAGCATT GCCAAATCTA ATTGAAGCAT TTCGAACAGA TGACGACCCT GTCGTACAAG GCTCATCAGC TGGCGCAATG GCAACTATTG GGGAACCTGC GATTGAACCA CTACTAGAAA TACTGACTGA TAACAAGTGC AGCGCATTTC AGGTTGGCCT GATTAACCTT GCCTTGAGCT TTGCCGGATC AAAAGCTCCT AATGCATTCA ACCAAGCCGC CCAATCAAAT AATCCTGAGA TAAGAATAGC GGCCCTTACA GCACTGGCCG AACAAGTGCA TTCAGGCACG AATGATCATG CCAAAGAACT ACTAATTCGA GCCTTAAATG ATGACGCAAG TGAGGTACGT GCTGAGGCTG CAACAATTAC TGGGAAGACT CTGGAGCTCG AGGAAATAAT TAATGAACTC TGCAGGCTAC TGAAAGACGA AGACAGTCAA GTAAGAATTA ACACAGCCTT AGCCTTAATG AAAACAGAGG CAGTATCTTC GATTAGCAAC TTACATGAAG CCCTTTCTTT AGAGGGCAAT GATCAAGCCA AGTCAGTGAT CAAAGTTGCA ATCAATCAAC TCGAAAAGAT TGGATAG
|
Protein sequence | MAAEASSHPI NAVEQLTEQE AYELAEELKL KLAEQIVPSS DQESIQKMVA GLGDPRGALR LTFAQSLGNI GAAAIPLLCD SLKNSPNILI RRASAKTLNI IGSKVALPNL IEAFRTDDDP VVQGSSAGAM ATIGEPAIEP LLEILTDNKC SAFQVGLINL ALSFAGSKAP NAFNQAAQSN NPEIRIAALT ALAEQVHSGT NDHAKELLIR ALNDDASEVR AEAATITGKT LELEEIINEL CRLLKDEDSQ VRINTALALM KTEAVSSISN LHEALSLEGN DQAKSVIKVA INQLEKIG
|
| |