Gene Syncc9902_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1894 
Symbol 
ID3742952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1815368 
End bp1815865 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID637772089 
ProductC-phycoerythrin class II alpha chain 
Protein accessionYP_377895 
Protein GI78185460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCCG TCATCACCAC CGTGGTCGGC GCAGCCGATA GCGCTTCCCG CTTCCCTTCT 
TCCTCCGACA TGGAGTCAGT TCAGGGTTCA ATCCAACGTG CTGCTGCACG TTTGGAAGCC
GCTGAAAAGC TCTCCCAGAA CTACGACGCC ATCGCCCAGC GCGCTGTTGA CGCCGTCTAC
GCCCAGTACC CCAACGGTGC AACTGGCCGT CAGCCACGCC AGTGCGCAAC TGAAGGTAAA
GAGAAGTGCA AGCGTGACTT TGTTCACTAC CTGCGTCTGA TCAACTACTG CTTGGTCACC
GGCGGCACCG GCCCCCTGGA TGAGCTGGCT ATCAATGGCC AAAAAGAGGT CTACAAGGCG
CTCAGCATCG ACGCTGGCAC CTATGTGGCT GGTTTCTCGC AGATGCGCAA CGACGGTTGC
GCCCCTCGCG ACATGAGCCC ACAGGCTCTG ACCTCCTACA ACACCCTGCT TGACTATGTG
ATCAACTCAC TGGGCTGA
 
Protein sequence
MKSVITTVVG AADSASRFPS SSDMESVQGS IQRAAARLEA AEKLSQNYDA IAQRAVDAVY 
AQYPNGATGR QPRQCATEGK EKCKRDFVHY LRLINYCLVT GGTGPLDELA INGQKEVYKA
LSIDAGTYVA GFSQMRNDGC APRDMSPQAL TSYNTLLDYV INSLG