Gene Syncc9902_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1892 
Symbol 
ID3742950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1813400 
End bp1814596 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content51% 
IMG OID637772087 
ProductCpeY-like 
Protein accessionYP_377893 
Protein GI78185458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGA GATTTGACAT TTTGTTTGAA GGAATGCCAG AGGAAAAAGC ATTATTGTTA 
TTAACGACAA ACCCTGACGA TCTTCCCAAT CCTGTTGACA AATATATGGC GGCAACCAAG
CTTGCTGCTT GCCAAAGCGA ACGCTCTTTA GAGGGATTGA TTGCAGCCGT ACAACTCGAT
CCTGAAAACC TCATCAACAG AATCACACGC AGAAAAGCTC TGGAAGCGCT CGGCCGCAGG
AAAGACGAGA AAGCGCTACC GAGCTTATTC AGTGCGCTGC GTTTCAATGA CGAACCTTCA
GTGATCAACG CGCTTGACTC GATCGCGCAG ATCGGATCCC CACTCACCGC AGACCAAAGC
GATCAACTCC TTGAGGCACT GCAAAGCAGT GACAACCAAA AGCGATCGGC GATCCAAGCT
CACACTCGGC TCAAGCTTTC AACGGGGGAA AAAGCAATCT CAGCCTTTGA GAACGATGAA
AATCCCTTGG TCGCTGGAGC AGCCCGGGCC TACACCGCCA AAGTTCTTGG GAAGGTTGAA
TCCCTTGAGC CGCTAGTCAA GCAACTCACT GATCCCGTCG CGGGACGACG ACGATCAGCT
GTGATCGACC TTGGCGACGC TGGAGATGCC AGCTTGCTGC GTCATCTGGT CACTTGCCCA
GTCTCAATGC CGTTGAGGGC AAAAAGCGCC TTTCAGCTGG TCGATCCCGA GAAGAGTGGT
CTAATCCCTG ACGACTACAT GGGCCTCCTA GAGCAACTAC TACGAGACGA CCCTTCCACG
CTCGCTTTAC AGAACGATTG GATTTGTGAG GGGGAAACTA TTGAGATCGA AAAGAATCTG
CAACATCGCG ATGAAGGCAA GCAATACGGC GGTGCACTAA GCCTGATGAG GATGCAGAAG
CAACAACAAA TTGATGCGAT TGAACAGATT CAGACCAAGC ATTGGAGTGA TTACGGCGCG
AACTACCTCT TGACATCGGT TATTGGACTT CAGAAAGTTG ATGAACACAG CAATCTGGTC
CGGACAGCAC TTGCTGAAAC ACTGCCGCAG TATGCAAAGT CGAGGGTTGC AGCGGCCTGG
GCTTGTCTGA GCCTGAACCT CTCAGACCAA GTCGACTTAC TCAGGGAGAT CCAGATCGAG
AGCAAATGGA CACCCCTTAG ATGGAGCTGC GAACGGGTAC TTCAACAGTT GTCATAA
 
Protein sequence
MSERFDILFE GMPEEKALLL LTTNPDDLPN PVDKYMAATK LAACQSERSL EGLIAAVQLD 
PENLINRITR RKALEALGRR KDEKALPSLF SALRFNDEPS VINALDSIAQ IGSPLTADQS
DQLLEALQSS DNQKRSAIQA HTRLKLSTGE KAISAFENDE NPLVAGAARA YTAKVLGKVE
SLEPLVKQLT DPVAGRRRSA VIDLGDAGDA SLLRHLVTCP VSMPLRAKSA FQLVDPEKSG
LIPDDYMGLL EQLLRDDPST LALQNDWICE GETIEIEKNL QHRDEGKQYG GALSLMRMQK
QQQIDAIEQI QTKHWSDYGA NYLLTSVIGL QKVDEHSNLV RTALAETLPQ YAKSRVAAAW
ACLSLNLSDQ VDLLREIQIE SKWTPLRWSC ERVLQQLS