Gene Syncc9902_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1885 
Symbol 
ID3742943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1809856 
End bp1810590 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content49% 
IMG OID637772080 
Productphycobilisome linker polypeptide 
Protein accessionYP_377886 
Protein GI78185451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.154256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA CCAAAACACT GGTCGCGCCT GCCAATACTG ACCTCGGCCA TGCCGATGAG 
GTTATTCAGT CGATCTACAA ACAGGTTTTT GGCAACCGTC ATCTGATGGA GCTAGATGTG 
AATAAATCAC TCGAAGCCTT GTTCATGAAT GGTGATCTAA CCGTTCAAGG TTTCGTCACA 
GCCTTGGCAC AATCAGAAAC CTACAGAAAG CTATTTCTTG AGCCAAACAG TCCTTACCGC 
TTTGTTGAGC TCAACTTCAA ACACATGCTT GGACGAGCAC CGCATGATCA AGCAGAACTG 
ATGGCGCACG TTCGTTTAAT GAACGATCAG GGATACGAGG CTGAAATTGC CAGCTACACC 
TATAGCGATG AATATCTGCA AGTTTTCGGT GTTGATCAAG TACCCCACAA CAGATCAACT 
CAAACCGTTA GCGGTGCCAG AACAATTAAT TTTCCGCGTG CCGCAGCTGT TGACGCTGGC 
TATGCAGGGT TTGATGGTGC CACTAAGGGA TCAAAACTAC TGAACAGCCT CTCAACAGGA 
AGTTCACCAG ACATCATCAA CCGCAAGAGC GTCGGCAATG CCAATGCCCT CAGAATCACA 
TGGACTTCAG GGCGGCAAAT TGGCGCCAAC CGGCGGGCTG TTCAGAAGTC GGTTGTAAGT 
CAGACCTCCA TGTCGGCAAC GATCCAAAGC ATCCTTAAGC AGGGTGGACG GATTTCTTCT 
ATTTCGAAGG CTTAA
 
Protein sequence
MTETKTLVAP ANTDLGHADE VIQSIYKQVF GNRHLMELDV NKSLEALFMN GDLTVQGFVT 
ALAQSETYRK LFLEPNSPYR FVELNFKHML GRAPHDQAEL MAHVRLMNDQ GYEAEIASYT 
YSDEYLQVFG VDQVPHNRST QTVSGARTIN FPRAAAVDAG YAGFDGATKG SKLLNSLSTG 
SSPDIINRKS VGNANALRIT WTSGRQIGAN RRAVQKSVVS QTSMSATIQS ILKQGGRISS 
ISKA