| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1881 |
|---|
| Symbol | |
|---|
| ID | 3742939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1805542 |
|---|
| End bp | 1806306 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637772076 |
|---|
| Product | phycobilisome rod-core linker polypeptide (L-RC 28.5) |
|---|
| Protein accession | YP_377882 |
|---|
| Protein GI | 78185447 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGC CCCTGCAGGT GTATCCCCTC ACAACACAAA ACGCACGGGT GAGCAATCTG
GCGGGGGATA GCAGCACGGT TCGCACGGAG CTGACGGGTT CTTCTGCGGG CGGCGCTGAT
GCATATCGCT CCGACGTCGA CAATTTGATC GAGCAGGCAT ATCAGCAGAT TTTTTTCCAT
GCGATGCGAA GCGATCGTGA GCCGTTTCTG GAATCGCAGC TGAGAAGCGG CAACATCACG
GCTCGAGATT TCATCCGGGG CTTGCTGCTC TCTGAACGGT TTCAGCAGGG CTATTACCAA
TGCAGCTCGA ACTACCGGAT GGTGGATCAA GTCGTAGGGC GTGTGCTCGG CCGCCCCGTC
CATGGCGAGG CTGAGCGCTT GGCCTGGTCG ATCGTGATTG GGGAGAAAGG ATTCACCACC
TTTGTGGACA CACTCCTTGA CAGCGATGAA TACATGAGCA GCTTCGGCTA CGACCTTGTG
CCGCAGCAAC GATCCCGCGT CCTGCCAGGA CGCTCACTCG GCGAGAGACC GATTTATCAG
AGCTTCCCCC GCTACGGAGC GGACTGGCGC GACTCTCTGC AAGAGAGAGC TCCCAGTGCT
CAGTTTGACG ATATGCAAGG CCAAACTTTG CAAGCCTCTG CGCTGTGGGT TAACGGACAA
CCACCGGCAT GGCTGCTCAA GGTCTGGTTG GGTCTCTTCG TTGTTGGAGG CTTCGAGATC
ACCAGGGTGC TGCTTACGAT CGCGATCTCA ATGGTTCGCA GCTGA
|
|---|
| Protein sequence | MAVPLQVYPL TTQNARVSNL AGDSSTVRTE LTGSSAGGAD AYRSDVDNLI EQAYQQIFFH
AMRSDREPFL ESQLRSGNIT ARDFIRGLLL SERFQQGYYQ CSSNYRMVDQ VVGRVLGRPV
HGEAERLAWS IVIGEKGFTT FVDTLLDSDE YMSSFGYDLV PQQRSRVLPG RSLGERPIYQ
SFPRYGADWR DSLQERAPSA QFDDMQGQTL QASALWVNGQ PPAWLLKVWL GLFVVGGFEI
TRVLLTIAIS MVRS
|
|---|
| |