Gene Syncc9902_1866 details

Gene Information

• Locus tag: Syncc9902_1866
• Symbol: nrdR
• ID: 3742179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1793780
• End bp: 1794256
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637772061
• Product: transcriptional regulator NrdR
• Protein accession: YP_377867
• Protein GI: 78185432
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.610385
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGTGCC CCTCCTGCCA AAACACAGAT AGTCGCGTTC TGGAATCCAG AGCTGCTGAT 
GGTGGTCGCA GTGTGCGTCG TCGTCGGGAA TGTCTTAACT GTGATTTTCG CTTCACCACT 
TACGAACGGG TCGAGACCGT TCCGATCACA GTGATTAAAC GAGATGGTTG CAGGGAACTC 
TTCAACCGCA CCAAGGTTCT GCATGGCTTG AGTCGAGCAT GCGATAAAAC CGGTCTCGAT 
GCTGCACGGC TTGAAACGGT CGTTGAGAAT CTCGAACTTC AACTGCAACA ACGCACTGCA 
AAAGAAGTTG CAAGTTCTGA AATCGGAGAA TTAGTTTTAA AGGAGCTCAA GCAAATCAGC 
GAAGTCGCCT ACATCCGTTT CGCATCGGTG TACAGACAAT TCCGAGGAAT CGACGATTTT 
GTGTCCACCT TGGAAACGAT GAACACAGAG CAGGAACATC TCGCAGCTGT CCGCTAA 

 

Protein sequence

MQCPSCQNTD SRVLESRAAD GGRSVRRRRE CLNCDFRFTT YERVETVPIT VIKRDGCREL 
FNRTKVLHGL SRACDKTGLD AARLETVVEN LELQLQQRTA KEVASSEIGE LVLKELKQIS 
EVAYIRFASV YRQFRGIDDF VSTLETMNTE QEHLAAVR